RNA–Protein interactions for RNA: ENST00000607664.1

GTF2H1-216, Transcript of general transcription factor IIH subunit 1, humanhuman

Gene GTF2H1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-216ENST00000607664 AEBP2Q6ZN18 517 aaPredicted RBP23.67■■□□□ 1.38
GTF2H1-216ENST00000607664 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
GTF2H1-216ENST00000607664 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
GTF2H1-216ENST00000607664 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
GTF2H1-216ENST00000607664 FOXD1Q16676 465 aa18.84■□□□□ 0.61
GTF2H1-216ENST00000607664 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
GTF2H1-216ENST00000607664 MSH5O43196 834 aa17.7■□□□□ 0.42
GTF2H1-216ENST00000607664 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
GTF2H1-216ENST00000607664 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
GTF2H1-216ENST00000607664 ADRA2BP18089 450 aa17.57■□□□□ 0.4
GTF2H1-216ENST00000607664 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
GTF2H1-216ENST00000607664 SCAF1Q9H7N4 1312 aaKnown RBP16.2■□□□□ 0.18
GTF2H1-216ENST00000607664 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
GTF2H1-216ENST00000607664 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
GTF2H1-216ENST00000607664 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
GTF2H1-216ENST00000607664 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
GTF2H1-216ENST00000607664 HOXD11P31277 338 aaPredicted RBP15.5■□□□□ 0.07
GTF2H1-216ENST00000607664 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
GTF2H1-216ENST00000607664 DCAF8L1A6NGE4 600 aa15.4■□□□□ 0.06
GTF2H1-216ENST00000607664 NCBP3Q53F19 620 aaKnown RBP15.31■□□□□ 0.04
GTF2H1-216ENST00000607664 CACNB1Q02641 598 aaPredicted RBP15.14■□□□□ 0.01
GTF2H1-216ENST00000607664 RNF39Q9H2S5 420 aa15.06■□□□□ 0
GTF2H1-216ENST00000607664 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
GTF2H1-216ENST00000607664 NPM3O75607 178 aaKnown RBP15□□□□□ -0.01
GTF2H1-216ENST00000607664 C1QBPQ07021 282 aaKnown RBP14.89□□□□□ -0.03
GTF2H1-216ENST00000607664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
GTF2H1-216ENST00000607664 KCNA4P22459 653 aa14.72□□□□□ -0.05
GTF2H1-216ENST00000607664 U3KPZ7 1027 aaPredicted RBP14.43□□□□□ -0.1
GTF2H1-216ENST00000607664 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
GTF2H1-216ENST00000607664 CAPN15O75808 1086 aa14.22□□□□□ -0.13
GTF2H1-216ENST00000607664 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
GTF2H1-216ENST00000607664 APLP2Q06481 763 aa14.17□□□□□ -0.14
GTF2H1-216ENST00000607664 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.14□□□□□ -0.15
GTF2H1-216ENST00000607664 HNRNPUL2Q1KMD3 747 aaKnown RBP14.14□□□□□ -0.15
GTF2H1-216ENST00000607664 DSG3P32926 999 aa14.11□□□□□ -0.15
GTF2H1-216ENST00000607664 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
GTF2H1-216ENST00000607664 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
GTF2H1-216ENST00000607664 TRHP20396 242 aaPredicted RBP13.99□□□□□ -0.17
GTF2H1-216ENST00000607664 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
GTF2H1-216ENST00000607664 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
GTF2H1-216ENST00000607664 ABCB7O75027 752 aa13.84□□□□□ -0.19
GTF2H1-216ENST00000607664 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
GTF2H1-216ENST00000607664 POLA2Q14181 598 aa13.62□□□□□ -0.23
GTF2H1-216ENST00000607664 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
GTF2H1-216ENST00000607664 ATF5Q9Y2D1 282 aaPredicted RBP13.5□□□□□ -0.25
GTF2H1-216ENST00000607664 ZBTB22O15209 634 aa13.49□□□□□ -0.25
GTF2H1-216ENST00000607664 POTEHQ6S545 545 aa13.46□□□□□ -0.25
GTF2H1-216ENST00000607664 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
GTF2H1-216ENST00000607664 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
GTF2H1-216ENST00000607664 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
GTF2H1-216ENST00000607664 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
GTF2H1-216ENST00000607664 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
GTF2H1-216ENST00000607664 FBLN2P98095 1184 aa13.09□□□□□ -0.31
GTF2H1-216ENST00000607664 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
GTF2H1-216ENST00000607664 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
GTF2H1-216ENST00000607664 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
GTF2H1-216ENST00000607664 SPDYE2Q495Y8 402 aa12.98□□□□□ -0.33
GTF2H1-216ENST00000607664 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
GTF2H1-216ENST00000607664 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
GTF2H1-216ENST00000607664 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
GTF2H1-216ENST00000607664 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
GTF2H1-216ENST00000607664 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
GTF2H1-216ENST00000607664 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
GTF2H1-216ENST00000607664 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
GTF2H1-216ENST00000607664 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
GTF2H1-216ENST00000607664 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
GTF2H1-216ENST00000607664 CLEC11AQ9Y240 323 aa12.69□□□□□ -0.38
GTF2H1-216ENST00000607664 SP7Q8TDD2 431 aaPredicted RBP12.64□□□□□ -0.39
GTF2H1-216ENST00000607664 HAX1O00165 279 aa12.63□□□□□ -0.39
GTF2H1-216ENST00000607664 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
GTF2H1-216ENST00000607664 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
GTF2H1-216ENST00000607664 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
GTF2H1-216ENST00000607664 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
GTF2H1-216ENST00000607664 EVX2Q03828 476 aa12.39□□□□□ -0.43
GTF2H1-216ENST00000607664 C19orf67A6NJJ6 358 aa12.38□□□□□ -0.43
GTF2H1-216ENST00000607664 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
GTF2H1-216ENST00000607664 STAG3Q9UJ98 1225 aa12.35□□□□□ -0.43
GTF2H1-216ENST00000607664 FARP1Q9Y4F1 1045 aaPredicted RBP12.27□□□□□ -0.45
GTF2H1-216ENST00000607664 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
GTF2H1-216ENST00000607664 GABBR2O75899 941 aa12.18□□□□□ -0.46
GTF2H1-216ENST00000607664 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
GTF2H1-216ENST00000607664 CLCN6P51797 869 aa12.12□□□□□ -0.47
GTF2H1-216ENST00000607664 PROM2Q8N271 834 aa12.06□□□□□ -0.48
GTF2H1-216ENST00000607664 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
GTF2H1-216ENST00000607664 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
GTF2H1-216ENST00000607664 ZNF579Q8NAF0 562 aaKnown RBP12.01□□□□□ -0.49
GTF2H1-216ENST00000607664 PAK3O75914 559 aaPredicted RBP11.99□□□□□ -0.49
GTF2H1-216ENST00000607664 MNX1P50219 401 aaPredicted RBP11.95□□□□□ -0.5
GTF2H1-216ENST00000607664 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
GTF2H1-216ENST00000607664 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
GTF2H1-216ENST00000607664 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
GTF2H1-216ENST00000607664 LHX8Q68G74 356 aa11.86□□□□□ -0.51
GTF2H1-216ENST00000607664 GALR2O43603 387 aaPredicted RBP11.82□□□□□ -0.52
GTF2H1-216ENST00000607664 MIER1Q8N108 512 aa11.81□□□□□ -0.52
GTF2H1-216ENST00000607664 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
GTF2H1-216ENST00000607664 FKBP8Q14318 412 aa11.76□□□□□ -0.53
GTF2H1-216ENST00000607664 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
GTF2H1-216ENST00000607664 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
GTF2H1-216ENST00000607664 ZBTB47Q9UFB7 747 aaPredicted RBP11.7□□□□□ -0.54
GTF2H1-216ENST00000607664 CCDC61Q9Y6R9 512 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms