RNA–Protein interactions for RNA: ENST00000640410.1

SETD1A-203, Transcript of SET domain containing 1A, humanhuman

TSL 3

Gene SETD1A, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-203ENST00000640410 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
SETD1A-203ENST00000640410 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
SETD1A-203ENST00000640410 ABCC9O60706 1549 aa35.98■■■■□ 3.35
SETD1A-203ENST00000640410 RB1CC1Q8TDY2 1594 aa34.33■■■■□ 3.09
SETD1A-203ENST00000640410 NACADO15069 1562 aa34.17■■■■□ 3.06
SETD1A-203ENST00000640410 DCAF8L2P0C7V8 631 aa34.03■■■■□ 3.04
SETD1A-203ENST00000640410 MYO15BQ96JP2 1530 aa33.79■■■■□ 3
SETD1A-203ENST00000640410 ZCCHC6Q5VYS8 1495 aaKnown RBP33.66■■■□□ 2.98
SETD1A-203ENST00000640410 UNC13AQ9UPW8 1703 aa33.59■■■□□ 2.97
SETD1A-203ENST00000640410 PABPN1Q86U42 306 aaKnown RBP eCLIP33.54■■■□□ 2.96
SETD1A-203ENST00000640410 DNAJC5BQ9UF47 199 aa33.52■■■□□ 2.96
SETD1A-203ENST00000640410 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
SETD1A-203ENST00000640410 BICRAQ9NZM4 1560 aa33.37■■■□□ 2.93
SETD1A-203ENST00000640410 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
SETD1A-203ENST00000640410 SHROOM4Q9ULL8 1493 aa32.91■■■□□ 2.86
SETD1A-203ENST00000640410 EIF4G1Q04637 1599 aaKnown RBP32.51■■■□□ 2.79
SETD1A-203ENST00000640410 CC2D2AQ9P2K1 1620 aa32.51■■■□□ 2.79
SETD1A-203ENST00000640410 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
SETD1A-203ENST00000640410 NCAPD3P42695 1498 aa31.55■■■□□ 2.64
SETD1A-203ENST00000640410 SMARCA4P51532 1647 aa31.54■■■□□ 2.64
SETD1A-203ENST00000640410 ATAD2BQ9ULI0 1458 aa31.52■■■□□ 2.64
SETD1A-203ENST00000640410 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
SETD1A-203ENST00000640410 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
SETD1A-203ENST00000640410 HMGXB3Q12766 1538 aa31.35■■■□□ 2.61
SETD1A-203ENST00000640410 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
SETD1A-203ENST00000640410 PEG3Q9GZU2 1588 aa31.23■■■□□ 2.59
SETD1A-203ENST00000640410 BAZ1BQ9UIG0 1483 aaKnown RBP31.21■■■□□ 2.59
SETD1A-203ENST00000640410 ERCC6Q03468 1493 aa31.02■■■□□ 2.56
SETD1A-203ENST00000640410 NESP48681 1621 aa31■■■□□ 2.55
SETD1A-203ENST00000640410 CUX2O14529 1486 aa30.88■■■□□ 2.53
SETD1A-203ENST00000640410 WIZO95785 1651 aa30.86■■■□□ 2.53
SETD1A-203ENST00000640410 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
SETD1A-203ENST00000640410 RSF1Q96T23 1441 aaPredicted RBP30.68■■■□□ 2.5
SETD1A-203ENST00000640410 THOC2Q8NI27 1593 aaKnown RBP30.63■■■□□ 2.49
SETD1A-203ENST00000640410 CADPSQ9ULU8 1353 aa30.61■■■□□ 2.49
SETD1A-203ENST00000640410 PDS5BQ9NTI5 1447 aa30.6■■■□□ 2.49
SETD1A-203ENST00000640410 KIF21AQ7Z4S6 1674 aa30.58■■■□□ 2.49
SETD1A-203ENST00000640410 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
SETD1A-203ENST00000640410 TOP2AP11388 1531 aaKnown RBP30.5■■■□□ 2.47
SETD1A-203ENST00000640410 MRC2Q9UBG0 1479 aa30.34■■■□□ 2.45
SETD1A-203ENST00000640410 CFTRP13569 1480 aa30.32■■■□□ 2.44
SETD1A-203ENST00000640410 FANCD2Q9BXW9 1451 aa30.27■■■□□ 2.44
SETD1A-203ENST00000640410 CEP164Q9UPV0 1460 aa30.27■■■□□ 2.44
SETD1A-203ENST00000640410 WDR62O43379 1518 aa30.27■■■□□ 2.44
SETD1A-203ENST00000640410 CCDC88BA6NC98 1476 aa30.14■■■□□ 2.42
SETD1A-203ENST00000640410 PRDM2Q13029 1718 aa30.03■■■□□ 2.4
SETD1A-203ENST00000640410 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.4
SETD1A-203ENST00000640410 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
SETD1A-203ENST00000640410 IFT140Q96RY7 1462 aa29.66■■■□□ 2.34
SETD1A-203ENST00000640410 ABCC8Q09428 1581 aa29.64■■■□□ 2.34
SETD1A-203ENST00000640410 DNMBPQ6XZF7 1577 aa29.64■■■□□ 2.34
SETD1A-203ENST00000640410 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
SETD1A-203ENST00000640410 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
SETD1A-203ENST00000640410 OSCARQ8IYS5 282 aa29.48■■■□□ 2.31
SETD1A-203ENST00000640410 EIF4G3O43432 1585 aaKnown RBP29.45■■■□□ 2.31
SETD1A-203ENST00000640410 POLA1P09884 1462 aaPredicted RBP29.45■■■□□ 2.31
SETD1A-203ENST00000640410 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
SETD1A-203ENST00000640410 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.29
SETD1A-203ENST00000640410 RAD54L2Q9Y4B4 1467 aa29.35■■■□□ 2.29
SETD1A-203ENST00000640410 TRIM41Q8WV44 630 aa29.33■■■□□ 2.29
SETD1A-203ENST00000640410 CUX1P39880 1505 aa29.33■■■□□ 2.29
SETD1A-203ENST00000640410 FGD5Q6ZNL6 1462 aa29.31■■■□□ 2.28
SETD1A-203ENST00000640410 SOGA1O94964 1423 aa29.29■■■□□ 2.28
SETD1A-203ENST00000640410 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
SETD1A-203ENST00000640410 CHD1O14646 1710 aa29.17■■■□□ 2.26
SETD1A-203ENST00000640410 WDR97A6NE52 1622 aa29.14■■■□□ 2.26
SETD1A-203ENST00000640410 RIMBP3CA6NJZ7 1639 aa29.12■■■□□ 2.25
SETD1A-203ENST00000640410 RIMBP3BA6NNM3 1639 aa29.12■■■□□ 2.25
SETD1A-203ENST00000640410 RIMBP3Q9UFD9 1639 aa29.12■■■□□ 2.25
SETD1A-203ENST00000640410 SNAPC4Q5SXM2 1469 aa29.09■■■□□ 2.25
SETD1A-203ENST00000640410 FBLN2P98095 1184 aa29.08■■■□□ 2.25
SETD1A-203ENST00000640410 ARHGEF11O15085 1522 aa29.06■■■□□ 2.24
SETD1A-203ENST00000640410 GRIN2BQ13224 1484 aa29.02■■■□□ 2.24
SETD1A-203ENST00000640410 MAGI1Q96QZ7 1491 aaPredicted RBP28.99■■■□□ 2.23
SETD1A-203ENST00000640410 ABCA10Q8WWZ4 1543 aa28.99■■■□□ 2.23
SETD1A-203ENST00000640410 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
SETD1A-203ENST00000640410 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
SETD1A-203ENST00000640410 PBRM1Q86U86 1689 aa28.93■■■□□ 2.22
SETD1A-203ENST00000640410 ABCA5Q8WWZ7 1642 aa28.92■■■□□ 2.22
SETD1A-203ENST00000640410 BIVM-ERCC5R4GMW8 1640 aa28.91■■■□□ 2.22
SETD1A-203ENST00000640410 CHMP7Q8WUX9 453 aaPredicted RBP28.91■■■□□ 2.22
SETD1A-203ENST00000640410 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
SETD1A-203ENST00000640410 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
SETD1A-203ENST00000640410 SYNJ2O15056 1496 aa28.89■■■□□ 2.22
SETD1A-203ENST00000640410 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
SETD1A-203ENST00000640410 ARAP1Q96P48 1450 aa28.81■■■□□ 2.2
SETD1A-203ENST00000640410 CYB5RLQ6IPT4 315 aa28.8■■■□□ 2.2
SETD1A-203ENST00000640410 ADAMTS12P58397 1594 aa28.7■■■□□ 2.18
SETD1A-203ENST00000640410 GRIN2AQ12879 1464 aa28.66■■■□□ 2.18
SETD1A-203ENST00000640410 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
SETD1A-203ENST00000640410 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
SETD1A-203ENST00000640410 NUP160Q12769 1436 aa28.56■■■□□ 2.16
SETD1A-203ENST00000640410 CEP170Q5SW79 1584 aa28.55■■■□□ 2.16
SETD1A-203ENST00000640410 ERCC6L2Q5T890 1561 aa28.45■■■□□ 2.14
SETD1A-203ENST00000640410 SHROOM2Q13796 1616 aa28.39■■■□□ 2.13
SETD1A-203ENST00000640410 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
SETD1A-203ENST00000640410 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
SETD1A-203ENST00000640410 IGF1RP08069 1367 aa28.32■■■□□ 2.12
SETD1A-203ENST00000640410 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
SETD1A-203ENST00000640410 CUL7Q14999 1698 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms