RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
SMARCC2-212ENST00000552566 ABCC9O60706 1549 aa30.62■■■□□ 2.49
SMARCC2-212ENST00000552566 CCDC180Q9P1Z9 1646 aa30.42■■■□□ 2.46
SMARCC2-212ENST00000552566 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
SMARCC2-212ENST00000552566 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
SMARCC2-212ENST00000552566 NACADO15069 1562 aa28.86■■■□□ 2.21
SMARCC2-212ENST00000552566 DNAJC5BQ9UF47 199 aa28.68■■■□□ 2.18
SMARCC2-212ENST00000552566 PABPN1Q86U42 306 aaKnown RBP eCLIP28.62■■■□□ 2.17
SMARCC2-212ENST00000552566 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.15
SMARCC2-212ENST00000552566 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
SMARCC2-212ENST00000552566 UNC13AQ9UPW8 1703 aa28.18■■■□□ 2.1
SMARCC2-212ENST00000552566 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
SMARCC2-212ENST00000552566 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
SMARCC2-212ENST00000552566 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
SMARCC2-212ENST00000552566 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
SMARCC2-212ENST00000552566 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
SMARCC2-212ENST00000552566 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
SMARCC2-212ENST00000552566 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
SMARCC2-212ENST00000552566 NCAPD3P42695 1498 aa26.7■■□□□ 1.87
SMARCC2-212ENST00000552566 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
SMARCC2-212ENST00000552566 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
SMARCC2-212ENST00000552566 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
SMARCC2-212ENST00000552566 BAZ1AQ9NRL2 1556 aaPredicted RBP26.47■■□□□ 1.83
SMARCC2-212ENST00000552566 ERCC6Q03468 1493 aa26.44■■□□□ 1.82
SMARCC2-212ENST00000552566 HMGXB3Q12766 1538 aa26.44■■□□□ 1.82
SMARCC2-212ENST00000552566 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
SMARCC2-212ENST00000552566 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.8
SMARCC2-212ENST00000552566 NESP48681 1621 aa26.29■■□□□ 1.8
SMARCC2-212ENST00000552566 CUX2O14529 1486 aa26.27■■□□□ 1.8
SMARCC2-212ENST00000552566 DNAJC5Q9H3Z4 198 aa26.26■■□□□ 1.79
SMARCC2-212ENST00000552566 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
SMARCC2-212ENST00000552566 LAMC3Q9Y6N6 1575 aa26.02■■□□□ 1.76
SMARCC2-212ENST00000552566 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
SMARCC2-212ENST00000552566 CADPSQ9ULU8 1353 aa25.95■■□□□ 1.74
SMARCC2-212ENST00000552566 WIZO95785 1651 aa25.94■■□□□ 1.74
SMARCC2-212ENST00000552566 THOC2Q8NI27 1593 aaKnown RBP25.87■■□□□ 1.73
SMARCC2-212ENST00000552566 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
SMARCC2-212ENST00000552566 KIF21AQ7Z4S6 1674 aa25.78■■□□□ 1.72
SMARCC2-212ENST00000552566 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
SMARCC2-212ENST00000552566 TOP2AP11388 1531 aaKnown RBP25.65■■□□□ 1.7
SMARCC2-212ENST00000552566 CEP164Q9UPV0 1460 aa25.65■■□□□ 1.7
SMARCC2-212ENST00000552566 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
SMARCC2-212ENST00000552566 CFTRP13569 1480 aa25.61■■□□□ 1.69
SMARCC2-212ENST00000552566 WDR62O43379 1518 aa25.58■■□□□ 1.69
SMARCC2-212ENST00000552566 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
SMARCC2-212ENST00000552566 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
SMARCC2-212ENST00000552566 TRIM41Q8WV44 630 aa25.27■■□□□ 1.64
SMARCC2-212ENST00000552566 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
SMARCC2-212ENST00000552566 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
SMARCC2-212ENST00000552566 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
SMARCC2-212ENST00000552566 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
SMARCC2-212ENST00000552566 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
SMARCC2-212ENST00000552566 ABCC8Q09428 1581 aa25.06■■□□□ 1.6
SMARCC2-212ENST00000552566 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
SMARCC2-212ENST00000552566 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
SMARCC2-212ENST00000552566 AQRO60306 1485 aaKnown RBP eCLIP24.92■■□□□ 1.581e-14■■□□□ 14
SMARCC2-212ENST00000552566 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.57
SMARCC2-212ENST00000552566 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
SMARCC2-212ENST00000552566 FBLN2P98095 1184 aa24.86■■□□□ 1.57
SMARCC2-212ENST00000552566 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
SMARCC2-212ENST00000552566 SOGA1O94964 1423 aa24.84■■□□□ 1.57
SMARCC2-212ENST00000552566 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
SMARCC2-212ENST00000552566 TDRD9Q8NDG6 1382 aaKnown RBP24.81■■□□□ 1.56
SMARCC2-212ENST00000552566 FGD5Q6ZNL6 1462 aa24.76■■□□□ 1.55
SMARCC2-212ENST00000552566 CUX1P39880 1505 aa24.71■■□□□ 1.55
SMARCC2-212ENST00000552566 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
SMARCC2-212ENST00000552566 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
SMARCC2-212ENST00000552566 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
SMARCC2-212ENST00000552566 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
SMARCC2-212ENST00000552566 CYB5RLQ6IPT4 315 aa24.66■■□□□ 1.54
SMARCC2-212ENST00000552566 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
SMARCC2-212ENST00000552566 SNAPC4Q5SXM2 1469 aa24.63■■□□□ 1.53
SMARCC2-212ENST00000552566 CHD1O14646 1710 aa24.58■■□□□ 1.53
SMARCC2-212ENST00000552566 GRIN2BQ13224 1484 aa24.57■■□□□ 1.52
SMARCC2-212ENST00000552566 MAGI1Q96QZ7 1491 aaPredicted RBP24.52■■□□□ 1.52
SMARCC2-212ENST00000552566 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
SMARCC2-212ENST00000552566 GAPVD1Q14C86 1478 aa24.5■■□□□ 1.51
SMARCC2-212ENST00000552566 ARAP1Q96P48 1450 aa24.47■■□□□ 1.51
SMARCC2-212ENST00000552566 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
SMARCC2-212ENST00000552566 ABCA10Q8WWZ4 1543 aa24.44■■□□□ 1.5
SMARCC2-212ENST00000552566 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
SMARCC2-212ENST00000552566 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
SMARCC2-212ENST00000552566 TRHP20396 242 aaPredicted RBP24.4■■□□□ 1.5
SMARCC2-212ENST00000552566 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.49
SMARCC2-212ENST00000552566 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
SMARCC2-212ENST00000552566 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
SMARCC2-212ENST00000552566 TOP2BQ02880 1626 aa24.28■■□□□ 1.48
SMARCC2-212ENST00000552566 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
SMARCC2-212ENST00000552566 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
SMARCC2-212ENST00000552566 FHAD1B1AJZ9 1412 aa24.2■■□□□ 1.46
SMARCC2-212ENST00000552566 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
SMARCC2-212ENST00000552566 NUP160Q12769 1436 aa24.14■■□□□ 1.45
SMARCC2-212ENST00000552566 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
SMARCC2-212ENST00000552566 CEP170Q5SW79 1584 aa24.1■■□□□ 1.45
SMARCC2-212ENST00000552566 ERCC6L2Q5T890 1561 aa24.06■■□□□ 1.44
SMARCC2-212ENST00000552566 JPH4Q96JJ6 628 aa24■■□□□ 1.43
SMARCC2-212ENST00000552566 PRG4Q92954 1404 aaPredicted RBP23.98■■□□□ 1.43
SMARCC2-212ENST00000552566 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
SMARCC2-212ENST00000552566 IGF1RP08069 1367 aa23.93■■□□□ 1.42
SMARCC2-212ENST00000552566 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms