RNA–Protein interactions for RNA: ENST00000476408.1

CD53-204, Transcript of CD53 molecule, humanhuman

TSL 5

Gene CD53, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-204ENST00000476408 AEBP2Q6ZN18 517 aaPredicted RBP13.71□□□□□ -0.21
CD53-204ENST00000476408 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
CD53-204ENST00000476408 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
CD53-204ENST00000476408 ABCC9O60706 1549 aa12.43□□□□□ -0.42
CD53-204ENST00000476408 CCDC180Q9P1Z9 1646 aa12.22□□□□□ -0.45
CD53-204ENST00000476408 DNAJC5BQ9UF47 199 aa12.07□□□□□ -0.48
CD53-204ENST00000476408 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
CD53-204ENST00000476408 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
CD53-204ENST00000476408 NACADO15069 1562 aa11.62□□□□□ -0.55
CD53-204ENST00000476408 DNAJC5Q9H3Z4 198 aa11.61□□□□□ -0.55
CD53-204ENST00000476408 ZCCHC6Q5VYS8 1495 aaKnown RBP11.6□□□□□ -0.55
CD53-204ENST00000476408 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
CD53-204ENST00000476408 PABPN1Q86U42 306 aaKnown RBP eCLIP11.54□□□□□ -0.56
CD53-204ENST00000476408 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
CD53-204ENST00000476408 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.56
CD53-204ENST00000476408 HRCP23327 699 aa11.44□□□□□ -0.58
CD53-204ENST00000476408 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
CD53-204ENST00000476408 BICRAQ9NZM4 1560 aa11.39□□□□□ -0.59
CD53-204ENST00000476408 MYO15BQ96JP2 1530 aa11.35□□□□□ -0.59
CD53-204ENST00000476408 CECR2Q9BXF3 1484 aa11.24□□□□□ -0.61
CD53-204ENST00000476408 CC2D2AQ9P2K1 1620 aa11.24□□□□□ -0.61
CD53-204ENST00000476408 SHROOM4Q9ULL8 1493 aa11.22□□□□□ -0.61
CD53-204ENST00000476408 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
CD53-204ENST00000476408 PELP1Q8IZL8 1130 aaKnown RBP11.17□□□□□ -0.62
CD53-204ENST00000476408 EIF4G1Q04637 1599 aaKnown RBP11.14□□□□□ -0.63
CD53-204ENST00000476408 ZEB1P37275 1124 aaPredicted RBP11.08□□□□□ -0.64
CD53-204ENST00000476408 SCRIBQ14160 1630 aa11.07□□□□□ -0.64
CD53-204ENST00000476408 TRIM26Q12899 539 aaPredicted RBP11□□□□□ -0.65
CD53-204ENST00000476408 FOXD1Q16676 465 aa10.99□□□□□ -0.65
CD53-204ENST00000476408 PCGF6Q9BYE7 350 aa10.98□□□□□ -0.65
CD53-204ENST00000476408 CUX2O14529 1486 aa10.93□□□□□ -0.66
CD53-204ENST00000476408 MYT1Q01538 1121 aa10.85□□□□□ -0.67
CD53-204ENST00000476408 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
CD53-204ENST00000476408 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
CD53-204ENST00000476408 TRIM41Q8WV44 630 aa10.76□□□□□ -0.69
CD53-204ENST00000476408 PPARGC1BQ86YN6 1023 aaKnown RBP10.75□□□□□ -0.69
CD53-204ENST00000476408 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
CD53-204ENST00000476408 POTEDQ86YR6 584 aa10.68□□□□□ -0.7
CD53-204ENST00000476408 LOC105371045A0A1W2PR82 267 aa10.66□□□□□ -0.7
CD53-204ENST00000476408 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
CD53-204ENST00000476408 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
CD53-204ENST00000476408 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
CD53-204ENST00000476408 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
CD53-204ENST00000476408 NESP48681 1621 aa10.59□□□□□ -0.71
CD53-204ENST00000476408 SCAF1Q9H7N4 1312 aaKnown RBP10.56□□□□□ -0.72
CD53-204ENST00000476408 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
CD53-204ENST00000476408 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
CD53-204ENST00000476408 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
CD53-204ENST00000476408 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
CD53-204ENST00000476408 EEA1Q15075 1411 aa10.52□□□□□ -0.73
CD53-204ENST00000476408 BAZ1BQ9UIG0 1483 aaKnown RBP10.51□□□□□ -0.73
CD53-204ENST00000476408 ACIN1Q9UKV3 1341 aaKnown RBP10.51□□□□□ -0.73
CD53-204ENST00000476408 CENPBP07199 599 aaPredicted RBP10.5□□□□□ -0.73
CD53-204ENST00000476408 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
CD53-204ENST00000476408 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
CD53-204ENST00000476408 PEG3Q9GZU2 1588 aa10.45□□□□□ -0.74
CD53-204ENST00000476408 CLSPNQ9HAW4 1339 aa10.42□□□□□ -0.74
CD53-204ENST00000476408 MROH2BQ7Z745 1585 aa10.42□□□□□ -0.74
CD53-204ENST00000476408 TNIKQ9UKE5 1360 aa10.4□□□□□ -0.74
CD53-204ENST00000476408 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
CD53-204ENST00000476408 MSH5O43196 834 aa10.39□□□□□ -0.75
CD53-204ENST00000476408 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
CD53-204ENST00000476408 MRC2Q9UBG0 1479 aa10.36□□□□□ -0.75
CD53-204ENST00000476408 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
CD53-204ENST00000476408 WDR62O43379 1518 aa10.35□□□□□ -0.75
CD53-204ENST00000476408 WIZO95785 1651 aa10.34□□□□□ -0.75
CD53-204ENST00000476408 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
CD53-204ENST00000476408 CCER1Q8TC90 406 aaPredicted RBP10.32□□□□□ -0.76
CD53-204ENST00000476408 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
CD53-204ENST00000476408 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
CD53-204ENST00000476408 KIF21BO75037 1637 aa10.29□□□□□ -0.76
CD53-204ENST00000476408 GOLGA3Q08378 1498 aa10.28□□□□□ -0.76
CD53-204ENST00000476408 CEP164Q9UPV0 1460 aa10.28□□□□□ -0.76
CD53-204ENST00000476408 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
CD53-204ENST00000476408 PIAS4Q8N2W9 510 aaPredicted RBP10.24□□□□□ -0.77
CD53-204ENST00000476408 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
CD53-204ENST00000476408 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
CD53-204ENST00000476408 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
CD53-204ENST00000476408 CCDC88BA6NC98 1476 aa10.21□□□□□ -0.78
CD53-204ENST00000476408 RIMBP3CA6NJZ7 1639 aa10.2□□□□□ -0.78
CD53-204ENST00000476408 RIMBP3BA6NNM3 1639 aa10.2□□□□□ -0.78
CD53-204ENST00000476408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
CD53-204ENST00000476408 RIMBP3Q9UFD9 1639 aa10.2□□□□□ -0.78
CD53-204ENST00000476408 FAM9AQ8IZU1 332 aaPredicted RBP10.19□□□□□ -0.78
CD53-204ENST00000476408 CFTRP13569 1480 aa10.18□□□□□ -0.78
CD53-204ENST00000476408 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
CD53-204ENST00000476408 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
CD53-204ENST00000476408 TRHP20396 242 aaPredicted RBP10.15□□□□□ -0.78
CD53-204ENST00000476408 URB2Q14146 1524 aaKnown RBP10.15□□□□□ -0.78
CD53-204ENST00000476408 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
CD53-204ENST00000476408 ABCC8Q09428 1581 aa10.13□□□□□ -0.79
CD53-204ENST00000476408 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
CD53-204ENST00000476408 CYB5RLQ6IPT4 315 aa10.11□□□□□ -0.79
CD53-204ENST00000476408 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
CD53-204ENST00000476408 SOGA1O94964 1423 aa10.1□□□□□ -0.79
CD53-204ENST00000476408 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
CD53-204ENST00000476408 ZNF608Q9ULD9 1512 aaPredicted RBP10.07□□□□□ -0.8
CD53-204ENST00000476408 CLIP1P30622 1438 aa10.07□□□□□ -0.8
CD53-204ENST00000476408 PPP6R1Q9UPN7 881 aa10.04□□□□□ -0.8
CD53-204ENST00000476408 CHD1O14646 1710 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms