RNA–Protein interactions for RNA: ENST00000271324.5

CD53-201, Transcript of CD53 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD53, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD53-201ENST00000271324 AEBP2Q6ZN18 517 aaPredicted RBP16.8■□□□□ 0.28
CD53-201ENST00000271324 NISCHQ9Y2I1 1504 aa16.1■□□□□ 0.17
CD53-201ENST00000271324 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
CD53-201ENST00000271324 CHIC1Q5VXU3 224 aa15.78■□□□□ 0.12
CD53-201ENST00000271324 ABCC9O60706 1549 aa14.68□□□□□ -0.06
CD53-201ENST00000271324 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
CD53-201ENST00000271324 SENP3Q9H4L4 574 aaPredicted RBP14.46□□□□□ -0.1
CD53-201ENST00000271324 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
CD53-201ENST00000271324 DNAJC5BQ9UF47 199 aa13.94□□□□□ -0.18
CD53-201ENST00000271324 RB1CC1Q8TDY2 1594 aa13.86□□□□□ -0.19
CD53-201ENST00000271324 NACADO15069 1562 aa13.71□□□□□ -0.21
CD53-201ENST00000271324 UNC13AQ9UPW8 1703 aa13.7□□□□□ -0.22
CD53-201ENST00000271324 DCAF8L2P0C7V8 631 aa13.69□□□□□ -0.22
CD53-201ENST00000271324 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
CD53-201ENST00000271324 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
CD53-201ENST00000271324 FOXD1Q16676 465 aa13.44□□□□□ -0.26
CD53-201ENST00000271324 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
CD53-201ENST00000271324 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
CD53-201ENST00000271324 SCRIBQ14160 1630 aa13.27□□□□□ -0.29
CD53-201ENST00000271324 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
CD53-201ENST00000271324 MSH5O43196 834 aa13.26□□□□□ -0.29
CD53-201ENST00000271324 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
CD53-201ENST00000271324 CECR2Q9BXF3 1484 aa13.2□□□□□ -0.3
CD53-201ENST00000271324 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
CD53-201ENST00000271324 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
CD53-201ENST00000271324 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
CD53-201ENST00000271324 NCAPD3P42695 1498 aa12.65□□□□□ -0.38
CD53-201ENST00000271324 ERCC6Q03468 1493 aa12.64□□□□□ -0.39
CD53-201ENST00000271324 CUX2O14529 1486 aa12.63□□□□□ -0.39
CD53-201ENST00000271324 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
CD53-201ENST00000271324 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
CD53-201ENST00000271324 NESP48681 1621 aa12.6□□□□□ -0.39
CD53-201ENST00000271324 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
CD53-201ENST00000271324 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
CD53-201ENST00000271324 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
CD53-201ENST00000271324 BAZ1BQ9UIG0 1483 aaKnown RBP12.49□□□□□ -0.41
CD53-201ENST00000271324 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
CD53-201ENST00000271324 CACNB1Q02641 598 aaPredicted RBP12.47□□□□□ -0.41
CD53-201ENST00000271324 PLPPR3Q6T4P5 718 aa12.47□□□□□ -0.41
CD53-201ENST00000271324 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
CD53-201ENST00000271324 KIF21AQ7Z4S6 1674 aa12.47□□□□□ -0.41
CD53-201ENST00000271324 PEG3Q9GZU2 1588 aa12.45□□□□□ -0.42
CD53-201ENST00000271324 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
CD53-201ENST00000271324 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
CD53-201ENST00000271324 WIZO95785 1651 aa12.33□□□□□ -0.44
CD53-201ENST00000271324 PDS5BQ9NTI5 1447 aa12.31□□□□□ -0.44
CD53-201ENST00000271324 PPP6R1Q9UPN7 881 aa12.31□□□□□ -0.44
CD53-201ENST00000271324 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.44
CD53-201ENST00000271324 ADRA2BP18089 450 aa12.25□□□□□ -0.45
CD53-201ENST00000271324 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
CD53-201ENST00000271324 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
CD53-201ENST00000271324 WDR62O43379 1518 aa12.23□□□□□ -0.45
CD53-201ENST00000271324 POTEHQ6S545 545 aa12.21□□□□□ -0.46
CD53-201ENST00000271324 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
CD53-201ENST00000271324 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
CD53-201ENST00000271324 CFTRP13569 1480 aa12.11□□□□□ -0.47
CD53-201ENST00000271324 RSF1Q96T23 1441 aaPredicted RBP12.1□□□□□ -0.47
CD53-201ENST00000271324 URB2Q14146 1524 aaKnown RBP12.09□□□□□ -0.47
CD53-201ENST00000271324 TOP2AP11388 1531 aaKnown RBP12.08□□□□□ -0.48
CD53-201ENST00000271324 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
CD53-201ENST00000271324 OSCARQ8IYS5 282 aa12.04□□□□□ -0.48
CD53-201ENST00000271324 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
CD53-201ENST00000271324 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
CD53-201ENST00000271324 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
CD53-201ENST00000271324 ZNF608Q9ULD9 1512 aaPredicted RBP11.98□□□□□ -0.49
CD53-201ENST00000271324 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
CD53-201ENST00000271324 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
CD53-201ENST00000271324 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CD53-201ENST00000271324 EIF4G3O43432 1585 aaKnown RBP11.91□□□□□ -0.5
CD53-201ENST00000271324 CHD1O14646 1710 aa11.9□□□□□ -0.51
CD53-201ENST00000271324 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
CD53-201ENST00000271324 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
CD53-201ENST00000271324 DNMBPQ6XZF7 1577 aa11.86□□□□□ -0.51
CD53-201ENST00000271324 AQRO60306 1485 aaKnown RBP eCLIP11.85□□□□□ -0.513e-7■■■□□ 16.8
CD53-201ENST00000271324 CYB5RLQ6IPT4 315 aa11.82□□□□□ -0.52
CD53-201ENST00000271324 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
CD53-201ENST00000271324 FBLN2P98095 1184 aa11.79□□□□□ -0.52
CD53-201ENST00000271324 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
CD53-201ENST00000271324 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
CD53-201ENST00000271324 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
CD53-201ENST00000271324 TDRD9Q8NDG6 1382 aaKnown RBP11.75□□□□□ -0.53
CD53-201ENST00000271324 SOGA1O94964 1423 aa11.72□□□□□ -0.53
CD53-201ENST00000271324 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
CD53-201ENST00000271324 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
CD53-201ENST00000271324 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
CD53-201ENST00000271324 CUX1P39880 1505 aa11.69□□□□□ -0.54
CD53-201ENST00000271324 CLASP1Q7Z460 1538 aa11.68□□□□□ -0.54
CD53-201ENST00000271324 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
CD53-201ENST00000271324 PBRM1Q86U86 1689 aa11.66□□□□□ -0.54
CD53-201ENST00000271324 CHMP7Q8WUX9 453 aaPredicted RBP11.64□□□□□ -0.55
CD53-201ENST00000271324 SYNJ1O43426 1573 aa11.63□□□□□ -0.55
CD53-201ENST00000271324 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
CD53-201ENST00000271324 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
CD53-201ENST00000271324 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
CD53-201ENST00000271324 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
CD53-201ENST00000271324 ABCA5Q8WWZ7 1642 aa11.57□□□□□ -0.56
CD53-201ENST00000271324 ERCC6L2Q5T890 1561 aa11.56□□□□□ -0.56
CD53-201ENST00000271324 ABCA10Q8WWZ4 1543 aa11.53□□□□□ -0.56
CD53-201ENST00000271324 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
CD53-201ENST00000271324 SUPT5HO00267 1087 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms