RNA–Protein interactions for RNA: ENST00000378736.3

ATAD3B-202, Transcript of ATPase family, AAA domain containing 3B, humanhuman

TSL 5

Gene ATAD3B, Length 414 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3B-202ENST00000378736 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
ATAD3B-202ENST00000378736 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
ATAD3B-202ENST00000378736 ABCC9O60706 1549 aa23.08■■□□□ 1.28
ATAD3B-202ENST00000378736 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
ATAD3B-202ENST00000378736 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
ATAD3B-202ENST00000378736 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
ATAD3B-202ENST00000378736 RB1CC1Q8TDY2 1594 aa21.16■□□□□ 0.98
ATAD3B-202ENST00000378736 CECR2Q9BXF3 1484 aa20.89■□□□□ 0.94
ATAD3B-202ENST00000378736 DCAF8L2P0C7V8 631 aa20.81■□□□□ 0.92
ATAD3B-202ENST00000378736 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
ATAD3B-202ENST00000378736 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
ATAD3B-202ENST00000378736 UNC13AQ9UPW8 1703 aa20.66■□□□□ 0.9
ATAD3B-202ENST00000378736 NACADO15069 1562 aa20.65■□□□□ 0.9
ATAD3B-202ENST00000378736 BICRAQ9NZM4 1560 aa20.64■□□□□ 0.9
ATAD3B-202ENST00000378736 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
ATAD3B-202ENST00000378736 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
ATAD3B-202ENST00000378736 CUX2O14529 1486 aa20.35■□□□□ 0.85
ATAD3B-202ENST00000378736 DCAF1Q9Y4B6 1507 aa20.29■□□□□ 0.84
ATAD3B-202ENST00000378736 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
ATAD3B-202ENST00000378736 SHROOM4Q9ULL8 1493 aa20.03■□□□□ 0.8
ATAD3B-202ENST00000378736 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
ATAD3B-202ENST00000378736 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
ATAD3B-202ENST00000378736 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
ATAD3B-202ENST00000378736 NESP48681 1621 aa19.41■□□□□ 0.7
ATAD3B-202ENST00000378736 OSCARQ8IYS5 282 aa19.39■□□□□ 0.69
ATAD3B-202ENST00000378736 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
ATAD3B-202ENST00000378736 ILDR1Q86SU0 546 aaPredicted RBP19.34■□□□□ 0.69
ATAD3B-202ENST00000378736 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
ATAD3B-202ENST00000378736 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
ATAD3B-202ENST00000378736 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
ATAD3B-202ENST00000378736 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
ATAD3B-202ENST00000378736 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
ATAD3B-202ENST00000378736 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
ATAD3B-202ENST00000378736 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
ATAD3B-202ENST00000378736 CYB5RLQ6IPT4 315 aa19.1■□□□□ 0.65
ATAD3B-202ENST00000378736 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
ATAD3B-202ENST00000378736 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
ATAD3B-202ENST00000378736 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
ATAD3B-202ENST00000378736 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
ATAD3B-202ENST00000378736 ARHGEF11O15085 1522 aa18.92■□□□□ 0.62
ATAD3B-202ENST00000378736 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
ATAD3B-202ENST00000378736 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
ATAD3B-202ENST00000378736 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
ATAD3B-202ENST00000378736 BAZ1BQ9UIG0 1483 aaKnown RBP18.87■□□□□ 0.61
ATAD3B-202ENST00000378736 PEG3Q9GZU2 1588 aa18.84■□□□□ 0.61
ATAD3B-202ENST00000378736 MRC2Q9UBG0 1479 aa18.79■□□□□ 0.6
ATAD3B-202ENST00000378736 WDR62O43379 1518 aa18.74■□□□□ 0.59
ATAD3B-202ENST00000378736 RSF1Q96T23 1441 aaPredicted RBP18.68■□□□□ 0.58
ATAD3B-202ENST00000378736 WIZO95785 1651 aa18.68■□□□□ 0.58
ATAD3B-202ENST00000378736 ARAP1Q96P48 1450 aa18.65■□□□□ 0.58
ATAD3B-202ENST00000378736 CADPSQ9ULU8 1353 aa18.56■□□□□ 0.56
ATAD3B-202ENST00000378736 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
ATAD3B-202ENST00000378736 CEP164Q9UPV0 1460 aa18.43■□□□□ 0.54
ATAD3B-202ENST00000378736 KDM4FA0A1W2PPD8 638 aa18.38■□□□□ 0.53
ATAD3B-202ENST00000378736 CFTRP13569 1480 aa18.33■□□□□ 0.52
ATAD3B-202ENST00000378736 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
ATAD3B-202ENST00000378736 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
ATAD3B-202ENST00000378736 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
ATAD3B-202ENST00000378736 FBLN2P98095 1184 aa18.31■□□□□ 0.52
ATAD3B-202ENST00000378736 SUPT5HO00267 1087 aaKnown RBP18.28■□□□□ 0.52
ATAD3B-202ENST00000378736 URB2Q14146 1524 aaKnown RBP18.26■□□□□ 0.51
ATAD3B-202ENST00000378736 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
ATAD3B-202ENST00000378736 CHD1O14646 1710 aa18.17■□□□□ 0.5
ATAD3B-202ENST00000378736 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
ATAD3B-202ENST00000378736 SOCS7O14512 581 aa18.12■□□□□ 0.49
ATAD3B-202ENST00000378736 IFT140Q96RY7 1462 aa18.12■□□□□ 0.49
ATAD3B-202ENST00000378736 PRDM2Q13029 1718 aa18.08■□□□□ 0.48
ATAD3B-202ENST00000378736 ILDR2Q71H61 639 aa18.06■□□□□ 0.48
ATAD3B-202ENST00000378736 AQRO60306 1485 aaKnown RBP eCLIP18.02■□□□□ 0.482e-8■■■■□ 22.6
ATAD3B-202ENST00000378736 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
ATAD3B-202ENST00000378736 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
ATAD3B-202ENST00000378736 ERCC6L2Q5T890 1561 aa17.99■□□□□ 0.47
ATAD3B-202ENST00000378736 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
ATAD3B-202ENST00000378736 TOPBP1Q92547 1522 aa17.94■□□□□ 0.46
ATAD3B-202ENST00000378736 HECW2Q9P2P5 1572 aa17.92■□□□□ 0.46
ATAD3B-202ENST00000378736 CLASP1Q7Z460 1538 aa17.92■□□□□ 0.46
ATAD3B-202ENST00000378736 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
ATAD3B-202ENST00000378736 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
ATAD3B-202ENST00000378736 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
ATAD3B-202ENST00000378736 FAM69CQ0P6D2 419 aa17.82■□□□□ 0.44
ATAD3B-202ENST00000378736 DISP3Q9P2K9 1392 aa17.8■□□□□ 0.44
ATAD3B-202ENST00000378736 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
ATAD3B-202ENST00000378736 SOGA1O94964 1423 aa17.8■□□□□ 0.44
ATAD3B-202ENST00000378736 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
ATAD3B-202ENST00000378736 POLA1P09884 1462 aaPredicted RBP17.77■□□□□ 0.44
ATAD3B-202ENST00000378736 CUX1P39880 1505 aa17.72■□□□□ 0.43
ATAD3B-202ENST00000378736 ADGRL1O94910 1474 aa17.72■□□□□ 0.43
ATAD3B-202ENST00000378736 FGD5Q6ZNL6 1462 aa17.72■□□□□ 0.43
ATAD3B-202ENST00000378736 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
ATAD3B-202ENST00000378736 TDRD9Q8NDG6 1382 aaKnown RBP17.71■□□□□ 0.43
ATAD3B-202ENST00000378736 KDM6BO15054 1643 aa17.7■□□□□ 0.42
ATAD3B-202ENST00000378736 TARBP1Q13395 1621 aaKnown RBP17.7■□□□□ 0.42
ATAD3B-202ENST00000378736 SNAPC4Q5SXM2 1469 aa17.69■□□□□ 0.42
ATAD3B-202ENST00000378736 WRNQ14191 1432 aaPredicted RBP eCLIP17.65■□□□□ 0.42
ATAD3B-202ENST00000378736 ABCC10Q5T3U5 1492 aa17.6■□□□□ 0.41
ATAD3B-202ENST00000378736 WDR97A6NE52 1622 aa17.58■□□□□ 0.41
ATAD3B-202ENST00000378736 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
ATAD3B-202ENST00000378736 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
ATAD3B-202ENST00000378736 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
ATAD3B-202ENST00000378736 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms