Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 AP006587.3-201ENST00000525742 1516 ntBASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KLHL4Q9C0H6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 AC092720.2-201ENST00000602388 1665 ntBASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 SMUG1P1-201ENST00000590640 811 ntBASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.28■□□□□ 0.68
KLHL4Q9C0H6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 AC123595.1-201ENST00000440769 1046 ntBASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
KLHL4Q9C0H6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.27■□□□□ 0.67
KLHL4Q9C0H6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.27■□□□□ 0.67
KLHL4Q9C0H6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.27■□□□□ 0.67
KLHL4Q9C0H6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
KLHL4Q9C0H6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.27■□□□□ 0.67
KLHL4Q9C0H6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
KLHL4Q9C0H6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms