Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 AC024257.2-201ENST00000549699 147 ntBASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHMP6Q96FZ7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 AC096631.2-201ENST00000436136 790 ntBASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 AL138781.2-201ENST00000617896 1843 ntBASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHMP6Q96FZ7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHMP6Q96FZ7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CHMP6Q96FZ7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 AC135279.3-201ENST00000610945 1311 ntBASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHMP6Q96FZ7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 SMUG1P1-201ENST00000590640 811 ntBASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.13■□□□□ 0.81
CHMP6Q96FZ7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 PBX2P1-201ENST00000493219 1291 ntBASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHMP6Q96FZ7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CHMP6Q96FZ7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms