Protein–RNA interactions for Protein: Q01081

U2AF1, Splicing factor U2AF 35 kDa subunit, humanhuman

Known RBP eCLIP

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1Q01081 SON-210ENST00000465834 957 ntTSL 39.25□□□□□ -0.934e-10■■□□□ 12.4
U2AF1Q01081 SON-212ENST00000470533 798 ntTSL 56.97□□□□□ -1.294e-10■■□□□ 12.4
U2AF1Q01081 SON-216ENST00000477419 771 ntTSL 24.01□□□□□ -1.774e-10■■□□□ 12.4
U2AF1Q01081 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.55□□□□□ -1.681e-323■■□□□ 12.3
U2AF1Q01081 SMG7-205ENST00000440812 1190 ntTSL 528.01■■■□□ 2.072e-8■■□□□ 12.3
U2AF1Q01081 SMG7-203ENST00000367538 328 ntTSL 224.74■■□□□ 1.552e-8■■□□□ 12.3
U2AF1Q01081 SMG7-206ENST00000444547 580 ntTSL 423.69■■□□□ 1.382e-8■■□□□ 12.3
U2AF1Q01081 SMG7-213ENST00000507691 760 ntTSL 522.85■■□□□ 1.252e-8■■□□□ 12.3
U2AF1Q01081 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 222.33■■□□□ 1.172e-8■■□□□ 12.3
U2AF1Q01081 SMG7-210ENST00000502375 566 ntTSL 520.12■□□□□ 0.812e-8■■□□□ 12.3
U2AF1Q01081 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.262e-8■■□□□ 12.3
U2AF1Q01081 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.012e-8■■□□□ 12.3
U2AF1Q01081 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.262e-8■■□□□ 12.3
U2AF1Q01081 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.312e-8■■□□□ 12.3
U2AF1Q01081 SMG7-216ENST00000638826 219 ntTSL 2 BASIC11.13□□□□□ -0.632e-8■■□□□ 12.3
U2AF1Q01081 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.72e-8■■□□□ 12.3
U2AF1Q01081 SMG7-208ENST00000493609 624 ntTSL 37.55□□□□□ -1.22e-8■■□□□ 12.3
U2AF1Q01081 PTPRS-207ENST00000589851 1270 ntTSL 521.18■□□□□ 0.984e-6■■□□□ 12.3
U2AF1Q01081 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.381e-6■■□□□ 12.3
U2AF1Q01081 AP001931.1-201ENST00000531074 580 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.022e-10■■□□□ 12.3
U2AF1Q01081 TMX2-CTNND1-201ENST00000528395 585 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -02e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-224ENST00000530068 579 ntTSL 414.78□□□□□ -0.042e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-235ENST00000533189 498 ntTSL 314.22□□□□□ -0.132e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.372e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC11.69□□□□□ -0.542e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC11.33□□□□□ -0.62e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.622e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC11.17□□□□□ -0.622e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC11.17□□□□□ -0.622e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.642e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC10.82□□□□□ -0.682e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC10.72□□□□□ -0.692e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC10.72□□□□□ -0.692e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC10.72□□□□□ -0.692e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC10.69□□□□□ -0.72e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC10.69□□□□□ -0.72e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC10.4□□□□□ -0.742e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC10.34□□□□□ -0.752e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.23□□□□□ -0.772e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC10.21□□□□□ -0.772e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC10.21□□□□□ -0.772e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC10.2□□□□□ -0.782e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.17□□□□□ -0.782e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC9.95□□□□□ -0.822e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC9.75□□□□□ -0.852e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC9.53□□□□□ -0.882e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC9.45□□□□□ -0.92e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC9.13□□□□□ -0.952e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.82□□□□□ -12e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.58□□□□□ -1.042e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.58□□□□□ -1.042e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.7□□□□□ -1.182e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.7□□□□□ -1.182e-10■■□□□ 12.3
U2AF1Q01081 CTNND1-209ENST00000524579 505 ntTSL 45.86□□□□□ -1.472e-10■■□□□ 12.3
U2AF1Q01081 SETD5-216ENST00000466172 248 ntTSL 22.41□□□□□ -2.027e-8■■□□□ 12.3
U2AF1Q01081 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.78■■■□□ 2.365e-8■■□□□ 12.3
U2AF1Q01081 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.875e-8■■□□□ 12.3
U2AF1Q01081 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.1■■□□□ 1.134e-7■■□□□ 12.3
U2AF1Q01081 CADM1-219ENST00000545960 630 ntTSL 521.2■□□□□ 0.984e-7■■□□□ 12.3
U2AF1Q01081 RPS27L-206ENST00000482846 2944 ntTSL 1 (best)19.35■□□□□ 0.694e-7■■□□□ 12.3
U2AF1Q01081 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC18.93■□□□□ 0.624e-7■■□□□ 12.3
U2AF1Q01081 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.314e-7■■□□□ 12.3
U2AF1Q01081 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.363e-9■■□□□ 12.3
U2AF1Q01081 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.363e-9■■□□□ 12.3
U2AF1Q01081 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.363e-9■■□□□ 12.3
U2AF1Q01081 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC9.3□□□□□ -0.924e-7■■□□□ 12.3
U2AF1Q01081 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.33□□□□□ -1.724e-7■■□□□ 12.3
U2AF1Q01081 OCIAD1-214ENST00000508329 448 ntTSL 53.98□□□□□ -1.776e-7■■□□□ 12.3
U2AF1Q01081 DCAF6-206ENST00000455334 796 ntTSL 525.58■■□□□ 1.692e-10■■□□□ 12.3
U2AF1Q01081 DCAF6-205ENST00000450548 724 ntTSL 324.56■■□□□ 1.522e-10■■□□□ 12.3
U2AF1Q01081 DCAF6-209ENST00000470919 827 ntTSL 25.12□□□□□ -1.592e-10■■□□□ 12.3
U2AF1Q01081 STT3B-202ENST00000423527 1664 ntTSL 234.4■■■■□ 3.16e-6■■□□□ 12.3
U2AF1Q01081 STT3B-204ENST00000453168 1888 ntTSL 1 (best)33.96■■■■□ 3.036e-6■■□□□ 12.3
U2AF1Q01081 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.846e-6■■□□□ 12.3
U2AF1Q01081 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.846e-6■■□□□ 12.3
U2AF1Q01081 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC8□□□□□ -1.136e-6■■□□□ 12.3
U2AF1Q01081 RAD23B-205ENST00000457811 811 ntTSL 36.9□□□□□ -1.36e-6■■□□□ 12.3
U2AF1Q01081 STT3B-205ENST00000462235 801 ntTSL 32.93□□□□□ -1.946e-6■■□□□ 12.3
U2AF1Q01081 HSP90B1-209ENST00000552051 581 ntTSL 211.78□□□□□ -0.521e-13■■□□□ 12.3
U2AF1Q01081 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.2■■■■□ 3.554e-8■■□□□ 12.3
U2AF1Q01081 CARM1-209ENST00000590699 2240 ntTSL 536.8■■■■□ 3.484e-8■■□□□ 12.3
U2AF1Q01081 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC34.44■■■■□ 3.14e-8■■□□□ 12.3
U2AF1Q01081 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC34.44■■■■□ 3.14e-8■■□□□ 12.3
U2AF1Q01081 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.17■■■■□ 3.064e-8■■□□□ 12.3
U2AF1Q01081 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC32.7■■■□□ 2.834e-8■■□□□ 12.3
U2AF1Q01081 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.16■■■□□ 2.584e-8■■□□□ 12.3
U2AF1Q01081 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.534e-8■■□□□ 12.3
U2AF1Q01081 MAZ-211ENST00000567444 635 ntTSL 230.12■■■□□ 2.414e-8■■□□□ 12.3
U2AF1Q01081 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.234e-8■■□□□ 12.3
U2AF1Q01081 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.96■■■□□ 2.074e-8■■□□□ 12.3
U2AF1Q01081 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC27.05■■□□□ 1.924e-8■■□□□ 12.3
U2AF1Q01081 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.884e-8■■□□□ 12.3
U2AF1Q01081 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.66■■□□□ 1.864e-8■■□□□ 12.3
U2AF1Q01081 MAZ-207ENST00000563012 646 ntTSL 326.47■■□□□ 1.834e-8■■□□□ 12.3
U2AF1Q01081 ATP5A1-213ENST00000590406 756 ntTSL 326.09■■□□□ 1.779e-20■■□□□ 12.3
U2AF1Q01081 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC24.06■■□□□ 1.444e-8■■□□□ 12.3
U2AF1Q01081 CARM1-205ENST00000586508 1050 ntTSL 222.41■■□□□ 1.184e-8■■□□□ 12.3
U2AF1Q01081 MAZ-209ENST00000565777 1313 ntTSL 222.3■■□□□ 1.164e-8■■□□□ 12.3
U2AF1Q01081 MAZ-213ENST00000568411 599 ntTSL 320.33■□□□□ 0.854e-8■■□□□ 12.3
U2AF1Q01081 CARM1-203ENST00000586221 2766 ntTSL 1 (best)19.95■□□□□ 0.784e-8■■□□□ 12.3
Retrieved 100 of 10,096 protein–RNA pairs in 54.9 ms