RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 AEBP2Q6ZN18 517 aaPredicted RBP31.13■■■□□ 2.57
SMG7-208ENST00000493609 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
SMG7-208ENST00000493609 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
SMG7-208ENST00000493609 PHF23Q9BUL5 403 aaPredicted RBP26.19■■□□□ 1.78
SMG7-208ENST00000493609 FOXD1Q16676 465 aa24.73■■□□□ 1.55
SMG7-208ENST00000493609 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
SMG7-208ENST00000493609 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
SMG7-208ENST00000493609 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
SMG7-208ENST00000493609 ADRA2BP18089 450 aa23.12■■□□□ 1.29
SMG7-208ENST00000493609 PIAS4Q8N2W9 510 aaPredicted RBP23.08■■□□□ 1.29
SMG7-208ENST00000493609 MSH5O43196 834 aa23.03■■□□□ 1.28
SMG7-208ENST00000493609 MAPK8IP2Q13387 824 aaPredicted RBP21.24■□□□□ 0.99
SMG7-208ENST00000493609 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
SMG7-208ENST00000493609 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
SMG7-208ENST00000493609 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
SMG7-208ENST00000493609 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
SMG7-208ENST00000493609 HOXD11P31277 338 aaPredicted RBP20.27■□□□□ 0.84
SMG7-208ENST00000493609 KCNA4P22459 653 aa20.26■□□□□ 0.83
SMG7-208ENST00000493609 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
SMG7-208ENST00000493609 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
SMG7-208ENST00000493609 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
SMG7-208ENST00000493609 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
SMG7-208ENST00000493609 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
SMG7-208ENST00000493609 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
SMG7-208ENST00000493609 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
SMG7-208ENST00000493609 C1QBPQ07021 282 aaKnown RBP19.38■□□□□ 0.69
SMG7-208ENST00000493609 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
SMG7-208ENST00000493609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMG7-208ENST00000493609 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
SMG7-208ENST00000493609 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
SMG7-208ENST00000493609 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
SMG7-208ENST00000493609 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
SMG7-208ENST00000493609 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
SMG7-208ENST00000493609 ZBTB22O15209 634 aa18.66■□□□□ 0.58
SMG7-208ENST00000493609 CAPN15O75808 1086 aa18.6■□□□□ 0.57
SMG7-208ENST00000493609 FOXD4L1Q9NU39 408 aa18.49■□□□□ 0.55
SMG7-208ENST00000493609 DSG3P32926 999 aa18.48■□□□□ 0.55
SMG7-208ENST00000493609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.33■□□□□ 0.52
SMG7-208ENST00000493609 TRHP20396 242 aaPredicted RBP18.33■□□□□ 0.52
SMG7-208ENST00000493609 HNRNPUL2Q1KMD3 747 aaKnown RBP18.33■□□□□ 0.52
SMG7-208ENST00000493609 APLP2Q06481 763 aa18.3■□□□□ 0.52
SMG7-208ENST00000493609 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
SMG7-208ENST00000493609 POTEHQ6S545 545 aa18.23■□□□□ 0.51
SMG7-208ENST00000493609 ZNF219Q9P2Y4 722 aaPredicted RBP18.23■□□□□ 0.51
SMG7-208ENST00000493609 ABCB7O75027 752 aa18.2■□□□□ 0.5
SMG7-208ENST00000493609 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
SMG7-208ENST00000493609 POLA2Q14181 598 aa17.85■□□□□ 0.45
SMG7-208ENST00000493609 ATF5Q9Y2D1 282 aaPredicted RBP17.84■□□□□ 0.45
SMG7-208ENST00000493609 ATXN8OSP0DMR3 200 aa17.78■□□□□ 0.44
SMG7-208ENST00000493609 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
SMG7-208ENST00000493609 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
SMG7-208ENST00000493609 OSCARQ8IYS5 282 aa17.27■□□□□ 0.36
SMG7-208ENST00000493609 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
SMG7-208ENST00000493609 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SMG7-208ENST00000493609 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
SMG7-208ENST00000493609 FBLN2P98095 1184 aa17.04■□□□□ 0.32
SMG7-208ENST00000493609 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
SMG7-208ENST00000493609 FKBP8Q14318 412 aa16.97■□□□□ 0.31
SMG7-208ENST00000493609 SPDYE2BA6NHP3 402 aa16.91■□□□□ 0.3
SMG7-208ENST00000493609 SPDYE6P0CI01 402 aa16.91■□□□□ 0.3
SMG7-208ENST00000493609 SPDYE2Q495Y8 402 aa16.91■□□□□ 0.3
SMG7-208ENST00000493609 PITPNM1O00562 1244 aa16.89■□□□□ 0.29
SMG7-208ENST00000493609 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
SMG7-208ENST00000493609 ZNF692Q9BU19 519 aaPredicted RBP16.75■□□□□ 0.27
SMG7-208ENST00000493609 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
SMG7-208ENST00000493609 SP7Q8TDD2 431 aaPredicted RBP16.72■□□□□ 0.27
SMG7-208ENST00000493609 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
SMG7-208ENST00000493609 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
SMG7-208ENST00000493609 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
SMG7-208ENST00000493609 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
SMG7-208ENST00000493609 HAX1O00165 279 aa16.51■□□□□ 0.23
SMG7-208ENST00000493609 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMG7-208ENST00000493609 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
SMG7-208ENST00000493609 EVX2Q03828 476 aa16.36■□□□□ 0.21
SMG7-208ENST00000493609 PROM2Q8N271 834 aa16.36■□□□□ 0.21
SMG7-208ENST00000493609 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
SMG7-208ENST00000493609 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
SMG7-208ENST00000493609 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
SMG7-208ENST00000493609 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
SMG7-208ENST00000493609 FARP1Q9Y4F1 1045 aaPredicted RBP16.05■□□□□ 0.16
SMG7-208ENST00000493609 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
SMG7-208ENST00000493609 VASPP50552 380 aaPredicted RBP16.02■□□□□ 0.16
SMG7-208ENST00000493609 STAG3Q9UJ98 1225 aa16.02■□□□□ 0.16
SMG7-208ENST00000493609 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
SMG7-208ENST00000493609 CREBZFQ9NS37 354 aa15.97■□□□□ 0.15
SMG7-208ENST00000493609 GABBR2O75899 941 aa15.96■□□□□ 0.15
SMG7-208ENST00000493609 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
SMG7-208ENST00000493609 IFNLR1Q8IU57 520 aaPredicted RBP15.86■□□□□ 0.13
SMG7-208ENST00000493609 MIER1Q8N108 512 aa15.75■□□□□ 0.11
SMG7-208ENST00000493609 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
SMG7-208ENST00000493609 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
SMG7-208ENST00000493609 MNX1P50219 401 aaPredicted RBP15.71■□□□□ 0.11
SMG7-208ENST00000493609 KLHL34Q8N239 644 aa15.7■□□□□ 0.1
SMG7-208ENST00000493609 LHX8Q68G74 356 aa15.67■□□□□ 0.1
SMG7-208ENST00000493609 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
SMG7-208ENST00000493609 POTEIP0CG38 1075 aa15.65■□□□□ 0.1
SMG7-208ENST00000493609 CLCN6P51797 869 aa15.63■□□□□ 0.09
SMG7-208ENST00000493609 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMG7-208ENST00000493609 SPOCK2Q92563 424 aa15.58■□□□□ 0.08
SMG7-208ENST00000493609 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms