Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FZD10-202ENST00000539839 3282 ntBASIC20.03■□□□□ 0.8
CCDC189A1A4V9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 CDV3P1-201ENST00000471403 739 ntBASIC20.03■□□□□ 0.8
CCDC189A1A4V9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCDC189A1A4V9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 AL032819.2-201ENST00000624543 2162 ntBASIC20.02■□□□□ 0.8
CCDC189A1A4V9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC189A1A4V9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC189A1A4V9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC189A1A4V9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC189A1A4V9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC189A1A4V9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 KRT8P36-201ENST00000489121 1440 ntBASIC20.01■□□□□ 0.79
CCDC189A1A4V9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC189A1A4V9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC189A1A4V9 PGM5P4-201ENST00000421970 445 ntBASIC20■□□□□ 0.79
CCDC189A1A4V9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 AL162412.1-201ENST00000567129 965 ntBASIC20■□□□□ 0.79
CCDC189A1A4V9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20■□□□□ 0.79
CCDC189A1A4V9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20■□□□□ 0.79
CCDC189A1A4V9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC189A1A4V9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20■□□□□ 0.79
CCDC189A1A4V9 AC004408.2-201ENST00000623613 2777 ntBASIC20■□□□□ 0.79
CCDC189A1A4V9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms