Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.81■□□□□ 0.28
TSPAN4O14817 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.81■□□□□ 0.28
TSPAN4O14817 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TSPAN4O14817 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.81■□□□□ 0.28
TSPAN4O14817 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TSPAN4O14817 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TSPAN4O14817 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TSPAN4O14817 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.8■□□□□ 0.28
TSPAN4O14817 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.8■□□□□ 0.28
TSPAN4O14817 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.8■□□□□ 0.28
TSPAN4O14817 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TSPAN4O14817 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TSPAN4O14817 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TSPAN4O14817 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
TSPAN4O14817 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TSPAN4O14817 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 AC099398.1-201ENST00000567919 2776 ntBASIC16.79■□□□□ 0.28
TSPAN4O14817 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TSPAN4O14817 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
TSPAN4O14817 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.79■□□□□ 0.28
TSPAN4O14817 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.78■□□□□ 0.28
TSPAN4O14817 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.78■□□□□ 0.28
TSPAN4O14817 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.78■□□□□ 0.28
TSPAN4O14817 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.78■□□□□ 0.28
TSPAN4O14817 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC16.78■□□□□ 0.28
TSPAN4O14817 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TSPAN4O14817 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.78■□□□□ 0.28
TSPAN4O14817 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TSPAN4O14817 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TSPAN4O14817 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
TSPAN4O14817 AL353803.4-201ENST00000565882 1934 ntBASIC16.78■□□□□ 0.28
TSPAN4O14817 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TSPAN4O14817 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.77■□□□□ 0.28
TSPAN4O14817 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TSPAN4O14817 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms