Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.04■□□□□ 0.48
CCRL2O00421 AP004607.4-201ENST00000530158 1459 ntBASIC18.04■□□□□ 0.48
CCRL2O00421 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.04■□□□□ 0.48
CCRL2O00421 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.04■□□□□ 0.48
CCRL2O00421 SLC47A1P1-202ENST00000449666 945 ntBASIC18.04■□□□□ 0.48
CCRL2O00421 AC131212.1-201ENST00000613771 668 ntBASIC18.04■□□□□ 0.48
CCRL2O00421 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.04■□□□□ 0.48
CCRL2O00421 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.04■□□□□ 0.48
CCRL2O00421 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.04■□□□□ 0.48
CCRL2O00421 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
CCRL2O00421 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCRL2O00421 AL691432.2-201ENST00000607222 2038 ntBASIC18.03■□□□□ 0.48
CCRL2O00421 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.03■□□□□ 0.48
CCRL2O00421 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.03■□□□□ 0.48
CCRL2O00421 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.03■□□□□ 0.48
CCRL2O00421 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.03■□□□□ 0.48
CCRL2O00421 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.03■□□□□ 0.48
CCRL2O00421 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCRL2O00421 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
CCRL2O00421 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CCRL2O00421 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCRL2O00421 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCRL2O00421 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.02■□□□□ 0.48
CCRL2O00421 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.02■□□□□ 0.48
CCRL2O00421 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.02■□□□□ 0.48
CCRL2O00421 AL512631.2-201ENST00000604634 923 ntBASIC18.02■□□□□ 0.48
CCRL2O00421 AL138724.1-201ENST00000606771 1088 ntBASIC18.02■□□□□ 0.48
CCRL2O00421 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.02■□□□□ 0.48
CCRL2O00421 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.02■□□□□ 0.48
CCRL2O00421 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.02■□□□□ 0.48
CCRL2O00421 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.02■□□□□ 0.48
CCRL2O00421 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.02■□□□□ 0.48
CCRL2O00421 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCRL2O00421 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
CCRL2O00421 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.02■□□□□ 0.47
CCRL2O00421 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CCRL2O00421 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCRL2O00421 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.01■□□□□ 0.47
CCRL2O00421 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CCRL2O00421 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.01■□□□□ 0.47
CCRL2O00421 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.01■□□□□ 0.47
CCRL2O00421 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.01■□□□□ 0.47
CCRL2O00421 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.01■□□□□ 0.47
CCRL2O00421 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCRL2O00421 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms