Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 KRT16P3-201ENST00000439127 1283 ntBASIC15.9■□□□□ 0.14
CDC34P49427 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.9■□□□□ 0.14
CDC34P49427 AC136469.2-201ENST00000623944 1028 ntBASIC15.9■□□□□ 0.14
CDC34P49427 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CDC34P49427 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC34P49427 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.9■□□□□ 0.14
CDC34P49427 AP004607.4-201ENST00000530158 1459 ntBASIC15.9■□□□□ 0.14
CDC34P49427 TMEM179-206ENST00000616017 1645 ntBASIC15.9■□□□□ 0.14
CDC34P49427 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.9■□□□□ 0.14
CDC34P49427 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CDC34P49427 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CDC34P49427 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CDC34P49427 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CDC34P49427 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDC34P49427 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.89■□□□□ 0.13
CDC34P49427 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CDC34P49427 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CDC34P49427 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CDC34P49427 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CDC34P49427 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.89■□□□□ 0.13
CDC34P49427 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC34P49427 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDC34P49427 SERBP1P1-201ENST00000396021 1160 ntBASIC15.88■□□□□ 0.13
CDC34P49427 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDC34P49427 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CDC34P49427 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.88■□□□□ 0.13
CDC34P49427 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDC34P49427 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.88■□□□□ 0.13
CDC34P49427 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.88■□□□□ 0.13
CDC34P49427 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDC34P49427 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.87■□□□□ 0.13
CDC34P49427 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDC34P49427 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.87■□□□□ 0.13
CDC34P49427 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.87■□□□□ 0.13
CDC34P49427 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.87■□□□□ 0.13
CDC34P49427 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.87■□□□□ 0.13
CDC34P49427 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.87■□□□□ 0.13
CDC34P49427 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDC34P49427 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDC34P49427 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDC34P49427 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDC34P49427 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.86■□□□□ 0.13
CDC34P49427 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.86■□□□□ 0.13
CDC34P49427 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms