Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 OPA1-206ENST00000392436 757 ntTSL 316.63■□□□□ 0.252e-6■■■■□ 22
MATR3P43243 NUP62-219ENST00000599830 588 ntTSL 416.31■□□□□ 0.22e-6■■■■□ 22
MATR3P43243 UBE2F-219ENST00000455999 760 ntTSL 516.14■□□□□ 0.172e-6■■■■□ 22
MATR3P43243 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.172e-6■■■■□ 22
MATR3P43243 GLG1-206ENST00000562090 4037 ntTSL 216.09■□□□□ 0.179e-7■■■■□ 22
MATR3P43243 UBE2F-216ENST00000445676 831 ntTSL 316.02■□□□□ 0.162e-6■■■■□ 22
MATR3P43243 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■■■□ 22
MATR3P43243 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.128e-12■■■■□ 22
MATR3P43243 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.75■□□□□ 0.112e-6■■■■□ 22
MATR3P43243 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.042e-6■■■■□ 22
MATR3P43243 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.032e-6■■■■□ 22
MATR3P43243 UBE2F-SCLY-202ENST00000449891 2902 ntAPPRIS ALT2 TSL 214.88□□□□□ -0.032e-6■■■■□ 22
MATR3P43243 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.74□□□□□ -0.055e-7■■■■□ 22
MATR3P43243 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.49□□□□□ -0.092e-6■■■■□ 22
MATR3P43243 TPT1-AS1-217ENST00000522859 769 ntTSL 214.26□□□□□ -0.135e-7■■■■□ 22
MATR3P43243 NUP62-215ENST00000599186 466 ntTSL 514.18□□□□□ -0.142e-6■■■■□ 22
MATR3P43243 NUP62-214ENST00000598301 565 ntTSL 414.18□□□□□ -0.142e-6■■■■□ 22
MATR3P43243 RBPJ-213ENST00000506956 566 ntTSL 414.03□□□□□ -0.162e-6■■■■□ 22
MATR3P43243 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.172e-6■■■■□ 22
MATR3P43243 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.212e-6■■■■□ 22
MATR3P43243 IL4I1-207ENST00000597295 651 ntTSL 313.56□□□□□ -0.242e-6■■■■□ 22
MATR3P43243 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC13.52□□□□□ -0.242e-6■■■■□ 22
MATR3P43243 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC13.39□□□□□ -0.275e-7■■■■□ 22
MATR3P43243 NUP62-223ENST00000601665 531 ntTSL 513.35□□□□□ -0.272e-6■■■■□ 22
MATR3P43243 IL4I1-205ENST00000596011 714 ntTSL 213.1□□□□□ -0.312e-6■■■■□ 22
MATR3P43243 NUP62-216ENST00000599560 562 ntTSL 213.04□□□□□ -0.322e-6■■■■□ 22
MATR3P43243 NUP62-209ENST00000596437 894 ntTSL 412.99□□□□□ -0.332e-6■■■■□ 22
MATR3P43243 NUP62-220ENST00000600583 782 ntTSL 412.99□□□□□ -0.332e-6■■■■□ 22
MATR3P43243 LINC01446-201ENST00000380970 3484 ntTSL 2 BASIC12.85□□□□□ -0.352e-6■■■■□ 22
MATR3P43243 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.362e-6■■■■□ 22
MATR3P43243 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.42e-6■■■■□ 22
MATR3P43243 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.412e-6■■■■□ 22
MATR3P43243 SNX29-204ENST00000564791 1633 ntTSL 1 (best)12.26□□□□□ -0.452e-6■■■■□ 22
MATR3P43243 PPP2R1B-210ENST00000531890 670 ntTSL 512.07□□□□□ -0.482e-6■■■■□ 22
MATR3P43243 GOT1-201ENST00000370508 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-6■■■■□ 22
MATR3P43243 C3orf35-204ENST00000425932 1528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.493e-7■■■■□ 22
MATR3P43243 NUP62-222ENST00000600935 587 ntTSL 411.89□□□□□ -0.512e-6■■■■□ 22
MATR3P43243 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.552e-6■■■■□ 22
MATR3P43243 GOT1-202ENST00000471741 716 ntTSL 211.6□□□□□ -0.552e-6■■■■□ 22
MATR3P43243 UBE2F-213ENST00000439780 571 ntTSL 511.44□□□□□ -0.582e-6■■■■□ 22
MATR3P43243 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.592e-6■■■■□ 22
MATR3P43243 PPP2R1B-212ENST00000534521 2294 ntTSL 211.34□□□□□ -0.592e-6■■■■□ 22
MATR3P43243 NUP62-218ENST00000599788 564 ntTSL 411.28□□□□□ -0.62e-6■■■■□ 22
MATR3P43243 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.622e-6■■■■□ 22
MATR3P43243 UBE2F-208ENST00000433241 803 ntTSL 211□□□□□ -0.652e-6■■■■□ 22
MATR3P43243 UBE2F-210ENST00000434137 472 ntTSL 511□□□□□ -0.652e-6■■■■□ 22
MATR3P43243 RAB3GAP2-207ENST00000478976 575 ntTSL 410.95□□□□□ -0.662e-6■■■■□ 22
MATR3P43243 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC10.89□□□□□ -0.672e-6■■■■□ 22
MATR3P43243 RAB3GAP2-204ENST00000474178 539 ntTSL 410.7□□□□□ -0.72e-6■■■■□ 22
MATR3P43243 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC10.48□□□□□ -0.735e-7■■■■□ 22
MATR3P43243 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.752e-6■■■■□ 22
MATR3P43243 PIP4K2A-203ENST00000422321 768 ntTSL 310.23□□□□□ -0.772e-6■■■■□ 22
MATR3P43243 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.82e-6■■■■□ 22
MATR3P43243 NUP62-203ENST00000593652 905 ntTSL 210.02□□□□□ -0.812e-6■■■■□ 22
MATR3P43243 UBE2F-211ENST00000434655 648 ntTSL 510□□□□□ -0.812e-6■■■■□ 22
MATR3P43243 NUP62-217ENST00000599567 579 ntTSL 49.87□□□□□ -0.832e-6■■■■□ 22
MATR3P43243 GLG1-204ENST00000561481 2487 ntTSL 29.5□□□□□ -0.891e-7■■■■□ 22
MATR3P43243 RAB3GAP2-206ENST00000475769 375 ntTSL 39.37□□□□□ -0.912e-6■■■■□ 22
MATR3P43243 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.34□□□□□ -0.912e-6■■■■□ 22
MATR3P43243 RBPJ-224ENST00000513182 537 ntTSL 49.15□□□□□ -0.942e-6■■■■□ 22
MATR3P43243 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -12e-6■■■■□ 22
MATR3P43243 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC8.44□□□□□ -1.065e-7■■■■□ 22
MATR3P43243 TPT1-AS1-212ENST00000520924 553 ntTSL 48.44□□□□□ -1.065e-7■■■■□ 22
MATR3P43243 NUP62-213ENST00000597814 510 ntTSL 48.32□□□□□ -1.082e-6■■■■□ 22
MATR3P43243 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.2□□□□□ -1.15e-7■■■■□ 22
MATR3P43243 SNX29-201ENST00000562510 536 ntTSL 38.13□□□□□ -1.112e-6■■■■□ 22
MATR3P43243 RBPJ-222ENST00000512351 609 ntTSL 47.66□□□□□ -1.182e-6■■■■□ 22
MATR3P43243 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.242e-6■■■■□ 22
MATR3P43243 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.29□□□□□ -1.242e-6■■■■□ 22
MATR3P43243 RBPJ-225ENST00000514380 1519 ntTSL 27.16□□□□□ -1.262e-6■■■■□ 22
MATR3P43243 NUP62-210ENST00000596680 473 ntTSL 27.07□□□□□ -1.282e-6■■■■□ 22
MATR3P43243 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.94□□□□□ -1.35e-7■■■■□ 22
MATR3P43243 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.86□□□□□ -1.312e-6■■■■□ 22
MATR3P43243 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.61□□□□□ -1.352e-6■■■■□ 22
MATR3P43243 PIP4K2A-207ENST00000604912 443 ntTSL 26.15□□□□□ -1.422e-6■■■■□ 22
MATR3P43243 RBPJ-218ENST00000510778 716 ntTSL 54.39□□□□□ -1.712e-6■■■■□ 22
MATR3P43243 DENND5A-207ENST00000527896 604 ntTSL 34.22□□□□□ -1.732e-6■■■■□ 22
MATR3P43243 PPP2R1B-207ENST00000529672 874 ntTSL 53.87□□□□□ -1.792e-6■■■■□ 22
MATR3P43243 RBPJ-219ENST00000511401 577 ntTSL 53.36□□□□□ -1.872e-6■■■■□ 22
MATR3P43243 RBPJ-229ENST00000514807 340 ntTSL 32.75□□□□□ -1.972e-6■■■■□ 22
MATR3P43243 RBPJ-230ENST00000515023 388 ntTSL 52.63□□□□□ -1.992e-6■■■■□ 22
MATR3P43243 PCMTD1-204ENST00000519975 995 ntTSL 24.83□□□□□ -1.643e-7■■■■□ 22
MATR3P43243 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.185e-7■■■■□ 22
MATR3P43243 PIP5K1B-202ENST00000377284 612 ntTSL 37.97□□□□□ -1.132e-6■■■■□ 22
MATR3P43243 PIP5K1B-203ENST00000437200 791 ntTSL 56.73□□□□□ -1.332e-6■■■■□ 22
MATR3P43243 PIP5K1B-204ENST00000440050 813 ntTSL 26.68□□□□□ -1.342e-6■■■■□ 22
MATR3P43243 MBD5-232ENST00000638090 2039 ntTSL 57.4□□□□□ -1.232e-6■■■■□ 22
MATR3P43243 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.692e-6■■■■□ 22
MATR3P43243 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.97□□□□□ -1.291e-6■■■■□ 22
MATR3P43243 LINC00534-202ENST00000523283 772 ntTSL 26.97□□□□□ -1.291e-6■■■■□ 22
MATR3P43243 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.16□□□□□ -1.741e-6■■■■□ 22
MATR3P43243 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.912e-7■■■■□ 22
MATR3P43243 PSMG4-201ENST00000324987 778 ntTSL 329.62■■■□□ 2.334e-7■■■■□ 22
MATR3P43243 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.62■■■□□ 2.334e-7■■■■□ 22
MATR3P43243 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.03■■■□□ 2.244e-7■■■■□ 22
MATR3P43243 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.874e-7■■■■□ 22
MATR3P43243 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.75■□□□□ 0.914e-7■■■■□ 22
MATR3P43243 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.06■□□□□ 04e-7■■■■□ 22
MATR3P43243 CA8-202ENST00000524872 1825 ntTSL 1 (best)20.2■□□□□ 0.828e-7■■■■□ 21.9
MATR3P43243 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.588e-7■■■■□ 21.9
Retrieved 100 of 16,209 protein–RNA pairs in 139.7 ms