RNA–Protein interactions for RNA: ENST00000475769.1

RAB3GAP2-206, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 3

Gene RAB3GAP2, Length 375 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-206ENST00000475769 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
RAB3GAP2-206ENST00000475769 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
RAB3GAP2-206ENST00000475769 ABCC9O60706 1549 aa17.78■□□□□ 0.44
RAB3GAP2-206ENST00000475769 NACADO15069 1562 aa17.25■□□□□ 0.35
RAB3GAP2-206ENST00000475769 MYO15BQ96JP2 1530 aa17.25■□□□□ 0.35
RAB3GAP2-206ENST00000475769 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
RAB3GAP2-206ENST00000475769 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
RAB3GAP2-206ENST00000475769 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
RAB3GAP2-206ENST00000475769 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
RAB3GAP2-206ENST00000475769 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
RAB3GAP2-206ENST00000475769 PABPN1Q86U42 306 aaKnown RBP eCLIP16.68■□□□□ 0.26
RAB3GAP2-206ENST00000475769 BICRAQ9NZM4 1560 aa16.67■□□□□ 0.26
RAB3GAP2-206ENST00000475769 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
RAB3GAP2-206ENST00000475769 SHROOM4Q9ULL8 1493 aa16.58■□□□□ 0.24
RAB3GAP2-206ENST00000475769 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
RAB3GAP2-206ENST00000475769 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
RAB3GAP2-206ENST00000475769 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
RAB3GAP2-206ENST00000475769 CECR2Q9BXF3 1484 aa16.08■□□□□ 0.16
RAB3GAP2-206ENST00000475769 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
RAB3GAP2-206ENST00000475769 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
RAB3GAP2-206ENST00000475769 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
RAB3GAP2-206ENST00000475769 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
RAB3GAP2-206ENST00000475769 MROH2BQ7Z745 1585 aa15.92■□□□□ 0.14
RAB3GAP2-206ENST00000475769 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
RAB3GAP2-206ENST00000475769 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
RAB3GAP2-206ENST00000475769 RSF1Q96T23 1441 aaPredicted RBP15.82■□□□□ 0.12
RAB3GAP2-206ENST00000475769 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
RAB3GAP2-206ENST00000475769 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
RAB3GAP2-206ENST00000475769 WIZO95785 1651 aa15.72■□□□□ 0.11
RAB3GAP2-206ENST00000475769 TOP2AP11388 1531 aaKnown RBP15.58■□□□□ 0.09
RAB3GAP2-206ENST00000475769 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
RAB3GAP2-206ENST00000475769 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
RAB3GAP2-206ENST00000475769 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
RAB3GAP2-206ENST00000475769 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
RAB3GAP2-206ENST00000475769 NESP48681 1621 aa15.43■□□□□ 0.06
RAB3GAP2-206ENST00000475769 CFTRP13569 1480 aa15.4■□□□□ 0.06
RAB3GAP2-206ENST00000475769 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
RAB3GAP2-206ENST00000475769 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
RAB3GAP2-206ENST00000475769 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
RAB3GAP2-206ENST00000475769 KIF21AQ7Z4S6 1674 aa15.21■□□□□ 0.03
RAB3GAP2-206ENST00000475769 CUX2O14529 1486 aa15.2■□□□□ 0.02
RAB3GAP2-206ENST00000475769 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
RAB3GAP2-206ENST00000475769 PRDM2Q13029 1718 aa15.19■□□□□ 0.02
RAB3GAP2-206ENST00000475769 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
RAB3GAP2-206ENST00000475769 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
RAB3GAP2-206ENST00000475769 WDR62O43379 1518 aa15.12■□□□□ 0.01
RAB3GAP2-206ENST00000475769 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
RAB3GAP2-206ENST00000475769 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
RAB3GAP2-206ENST00000475769 TOPBP1Q92547 1522 aa15.01□□□□□ -0.01
RAB3GAP2-206ENST00000475769 DNMBPQ6XZF7 1577 aa14.98□□□□□ -0.01
RAB3GAP2-206ENST00000475769 CUX1P39880 1505 aa14.92□□□□□ -0.02
RAB3GAP2-206ENST00000475769 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
RAB3GAP2-206ENST00000475769 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
RAB3GAP2-206ENST00000475769 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
RAB3GAP2-206ENST00000475769 SOGA1O94964 1423 aa14.87□□□□□ -0.03
RAB3GAP2-206ENST00000475769 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
RAB3GAP2-206ENST00000475769 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
RAB3GAP2-206ENST00000475769 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
RAB3GAP2-206ENST00000475769 RAD54L2Q9Y4B4 1467 aa14.81□□□□□ -0.04
RAB3GAP2-206ENST00000475769 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
RAB3GAP2-206ENST00000475769 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
RAB3GAP2-206ENST00000475769 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
RAB3GAP2-206ENST00000475769 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
RAB3GAP2-206ENST00000475769 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
RAB3GAP2-206ENST00000475769 AQRO60306 1485 aaKnown RBP eCLIP14.75□□□□□ -0.05
RAB3GAP2-206ENST00000475769 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
RAB3GAP2-206ENST00000475769 EIF4G3O43432 1585 aaKnown RBP14.69□□□□□ -0.06
RAB3GAP2-206ENST00000475769 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
RAB3GAP2-206ENST00000475769 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
RAB3GAP2-206ENST00000475769 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
RAB3GAP2-206ENST00000475769 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
RAB3GAP2-206ENST00000475769 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
RAB3GAP2-206ENST00000475769 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
RAB3GAP2-206ENST00000475769 MAGI1Q96QZ7 1491 aaPredicted RBP14.62□□□□□ -0.07
RAB3GAP2-206ENST00000475769 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
RAB3GAP2-206ENST00000475769 SNAPC4Q5SXM2 1469 aa14.58□□□□□ -0.08
RAB3GAP2-206ENST00000475769 ERICH3Q5RHP9 1530 aa14.58□□□□□ -0.08
RAB3GAP2-206ENST00000475769 CHMP7Q8WUX9 453 aaPredicted RBP14.57□□□□□ -0.08
RAB3GAP2-206ENST00000475769 IGF1RP08069 1367 aa14.56□□□□□ -0.08
RAB3GAP2-206ENST00000475769 SYNJ2O15056 1496 aa14.56□□□□□ -0.08
RAB3GAP2-206ENST00000475769 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
RAB3GAP2-206ENST00000475769 FBLN2P98095 1184 aa14.54□□□□□ -0.08
RAB3GAP2-206ENST00000475769 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
RAB3GAP2-206ENST00000475769 FHAD1B1AJZ9 1412 aa14.53□□□□□ -0.08
RAB3GAP2-206ENST00000475769 CHD1O14646 1710 aa14.47□□□□□ -0.09
RAB3GAP2-206ENST00000475769 ADAMTS12P58397 1594 aa14.47□□□□□ -0.09
RAB3GAP2-206ENST00000475769 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.1
RAB3GAP2-206ENST00000475769 GRIN2AQ12879 1464 aa14.45□□□□□ -0.1
RAB3GAP2-206ENST00000475769 RUSC2Q8N2Y8 1516 aa14.44□□□□□ -0.1
RAB3GAP2-206ENST00000475769 CUL7Q14999 1698 aa14.42□□□□□ -0.1
RAB3GAP2-206ENST00000475769 NUP160Q12769 1436 aa14.42□□□□□ -0.1
RAB3GAP2-206ENST00000475769 EEA1Q15075 1411 aa14.41□□□□□ -0.1
RAB3GAP2-206ENST00000475769 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
RAB3GAP2-206ENST00000475769 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
RAB3GAP2-206ENST00000475769 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
RAB3GAP2-206ENST00000475769 PRXQ9BXM0 1461 aa14.35□□□□□ -0.11
RAB3GAP2-206ENST00000475769 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
RAB3GAP2-206ENST00000475769 JPH4Q96JJ6 628 aa14.33□□□□□ -0.12
RAB3GAP2-206ENST00000475769 KIAA0586Q9BVV6 1533 aa14.32□□□□□ -0.12
RAB3GAP2-206ENST00000475769 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms