RNA–Protein interactions for RNA: ENST00000519975.1

PCMTD1-204, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 2

Gene PCMTD1, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-204ENST00000519975 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
PCMTD1-204ENST00000519975 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
PCMTD1-204ENST00000519975 SENP3Q9H4L4 574 aaPredicted RBP23.22■■□□□ 1.31
PCMTD1-204ENST00000519975 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
PCMTD1-204ENST00000519975 FOXD1Q16676 465 aa21.68■■□□□ 1.06
PCMTD1-204ENST00000519975 POTEDQ86YR6 584 aa20.97■□□□□ 0.95
PCMTD1-204ENST00000519975 MSH5O43196 834 aa20.41■□□□□ 0.86
PCMTD1-204ENST00000519975 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.85
PCMTD1-204ENST00000519975 PIAS4Q8N2W9 510 aaPredicted RBP20.23■□□□□ 0.83
PCMTD1-204ENST00000519975 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
PCMTD1-204ENST00000519975 ADRA2BP18089 450 aa20.07■□□□□ 0.8
PCMTD1-204ENST00000519975 MAPK8IP2Q13387 824 aaPredicted RBP18.49■□□□□ 0.55
PCMTD1-204ENST00000519975 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
PCMTD1-204ENST00000519975 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
PCMTD1-204ENST00000519975 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
PCMTD1-204ENST00000519975 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
PCMTD1-204ENST00000519975 DCAF8L1A6NGE4 600 aa17.71■□□□□ 0.43
PCMTD1-204ENST00000519975 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
PCMTD1-204ENST00000519975 CNKSR2Q8WXI2 1034 aa17.55■□□□□ 0.4
PCMTD1-204ENST00000519975 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
PCMTD1-204ENST00000519975 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
PCMTD1-204ENST00000519975 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
PCMTD1-204ENST00000519975 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
PCMTD1-204ENST00000519975 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
PCMTD1-204ENST00000519975 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
PCMTD1-204ENST00000519975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCMTD1-204ENST00000519975 U3KPZ7 1027 aaPredicted RBP16.44■□□□□ 0.22
PCMTD1-204ENST00000519975 KCNA4P22459 653 aa16.39■□□□□ 0.21
PCMTD1-204ENST00000519975 POTEHQ6S545 545 aa16.31■□□□□ 0.2
PCMTD1-204ENST00000519975 SPINK5Q9NQ38 1064 aaPredicted RBP16.28■□□□□ 0.2
PCMTD1-204ENST00000519975 CAPN15O75808 1086 aa16.27■□□□□ 0.2
PCMTD1-204ENST00000519975 DSG3P32926 999 aa16.18■□□□□ 0.18
PCMTD1-204ENST00000519975 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
PCMTD1-204ENST00000519975 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
PCMTD1-204ENST00000519975 APLP2Q06481 763 aa15.94■□□□□ 0.14
PCMTD1-204ENST00000519975 ZNF219Q9P2Y4 722 aaPredicted RBP15.9■□□□□ 0.14
PCMTD1-204ENST00000519975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
PCMTD1-204ENST00000519975 ABCB7O75027 752 aa15.89■□□□□ 0.13
PCMTD1-204ENST00000519975 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
PCMTD1-204ENST00000519975 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
PCMTD1-204ENST00000519975 MYCNP04198 464 aaPredicted RBP15.6■□□□□ 0.09
PCMTD1-204ENST00000519975 POLA2Q14181 598 aa15.47■□□□□ 0.07
PCMTD1-204ENST00000519975 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
PCMTD1-204ENST00000519975 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
PCMTD1-204ENST00000519975 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
PCMTD1-204ENST00000519975 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
PCMTD1-204ENST00000519975 CHRDL2Q6WN34 429 aa15.26■□□□□ 0.03
PCMTD1-204ENST00000519975 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
PCMTD1-204ENST00000519975 ZBTB22O15209 634 aa15.06■□□□□ 0
PCMTD1-204ENST00000519975 AKT1S1Q96B36 256 aa15.04■□□□□ -0
PCMTD1-204ENST00000519975 SP7Q8TDD2 431 aaPredicted RBP15.01□□□□□ -0.01
PCMTD1-204ENST00000519975 OSCARQ8IYS5 282 aa15□□□□□ -0.01
PCMTD1-204ENST00000519975 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
PCMTD1-204ENST00000519975 ATXN8OSP0DMR3 200 aa14.85□□□□□ -0.03
PCMTD1-204ENST00000519975 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
PCMTD1-204ENST00000519975 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
PCMTD1-204ENST00000519975 HAX1O00165 279 aa14.69□□□□□ -0.06
PCMTD1-204ENST00000519975 FBLN2P98095 1184 aa14.69□□□□□ -0.06
PCMTD1-204ENST00000519975 FXR2P51116 673 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCMTD1-204ENST00000519975 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
PCMTD1-204ENST00000519975 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
PCMTD1-204ENST00000519975 SPDYE2Q495Y8 402 aa14.64□□□□□ -0.07
PCMTD1-204ENST00000519975 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
PCMTD1-204ENST00000519975 EVX2Q03828 476 aa14.47□□□□□ -0.09
PCMTD1-204ENST00000519975 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
PCMTD1-204ENST00000519975 ZNF692Q9BU19 519 aaPredicted RBP14.46□□□□□ -0.09
PCMTD1-204ENST00000519975 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
PCMTD1-204ENST00000519975 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
PCMTD1-204ENST00000519975 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
PCMTD1-204ENST00000519975 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
PCMTD1-204ENST00000519975 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
PCMTD1-204ENST00000519975 C19orf67A6NJJ6 358 aa14.2□□□□□ -0.14
PCMTD1-204ENST00000519975 CSRNP3Q8WYN3 585 aa14.18□□□□□ -0.14
PCMTD1-204ENST00000519975 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
PCMTD1-204ENST00000519975 GABBR2O75899 941 aa14.1□□□□□ -0.15
PCMTD1-204ENST00000519975 LHX8Q68G74 356 aa14.08□□□□□ -0.16
PCMTD1-204ENST00000519975 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
PCMTD1-204ENST00000519975 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
PCMTD1-204ENST00000519975 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
PCMTD1-204ENST00000519975 POTEIP0CG38 1075 aa13.8□□□□□ -0.2
PCMTD1-204ENST00000519975 STAG3Q9UJ98 1225 aa13.78□□□□□ -0.2
PCMTD1-204ENST00000519975 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
PCMTD1-204ENST00000519975 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
PCMTD1-204ENST00000519975 CLCN6P51797 869 aa13.71□□□□□ -0.21
PCMTD1-204ENST00000519975 PLSCR2Q9NRY7 297 aa13.71□□□□□ -0.21
PCMTD1-204ENST00000519975 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
PCMTD1-204ENST00000519975 ZNF579Q8NAF0 562 aaKnown RBP13.68□□□□□ -0.22
PCMTD1-204ENST00000519975 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
PCMTD1-204ENST00000519975 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
PCMTD1-204ENST00000519975 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
PCMTD1-204ENST00000519975 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCMTD1-204ENST00000519975 PHF12Q96QT6 1004 aa13.51□□□□□ -0.25
PCMTD1-204ENST00000519975 MNX1P50219 401 aaPredicted RBP13.5□□□□□ -0.25
PCMTD1-204ENST00000519975 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
PCMTD1-204ENST00000519975 PROM2Q8N271 834 aa13.37□□□□□ -0.27
PCMTD1-204ENST00000519975 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
PCMTD1-204ENST00000519975 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
PCMTD1-204ENST00000519975 POTEMA6NI47 508 aa13.3□□□□□ -0.28
PCMTD1-204ENST00000519975 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
PCMTD1-204ENST00000519975 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms