RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
SNX29-201ENST00000562510 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
SNX29-201ENST00000562510 SENP3Q9H4L4 574 aaPredicted RBP20.15■□□□□ 0.82
SNX29-201ENST00000562510 PHF23Q9BUL5 403 aaPredicted RBP20.14■□□□□ 0.81
SNX29-201ENST00000562510 FOXD1Q16676 465 aa18.69■□□□□ 0.58
SNX29-201ENST00000562510 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
SNX29-201ENST00000562510 ADRA2BP18089 450 aa17.86■□□□□ 0.45
SNX29-201ENST00000562510 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
SNX29-201ENST00000562510 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
SNX29-201ENST00000562510 MSH5O43196 834 aa17.33■□□□□ 0.36
SNX29-201ENST00000562510 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
SNX29-201ENST00000562510 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
SNX29-201ENST00000562510 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
SNX29-201ENST00000562510 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
SNX29-201ENST00000562510 POTEDQ86YR6 584 aa16.08■□□□□ 0.16
SNX29-201ENST00000562510 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
SNX29-201ENST00000562510 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
SNX29-201ENST00000562510 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
SNX29-201ENST00000562510 KCNA4P22459 653 aa15.78■□□□□ 0.12
SNX29-201ENST00000562510 RNF216Q9NWF9 866 aaPredicted RBP15.64■□□□□ 0.09
SNX29-201ENST00000562510 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
SNX29-201ENST00000562510 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
SNX29-201ENST00000562510 ABCC9O60706 1549 aa15.51■□□□□ 0.07
SNX29-201ENST00000562510 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
SNX29-201ENST00000562510 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
SNX29-201ENST00000562510 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
SNX29-201ENST00000562510 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
SNX29-201ENST00000562510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.01
SNX29-201ENST00000562510 RNF39Q9H2S5 420 aa14.81□□□□□ -0.04
SNX29-201ENST00000562510 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
SNX29-201ENST00000562510 RB1CC1Q8TDY2 1594 aa14.64□□□□□ -0.07
SNX29-201ENST00000562510 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
SNX29-201ENST00000562510 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
SNX29-201ENST00000562510 U3KPZ7 1027 aaPredicted RBP14.64□□□□□ -0.07
SNX29-201ENST00000562510 FOXD4L1Q9NU39 408 aa14.58□□□□□ -0.08
SNX29-201ENST00000562510 NACADO15069 1562 aa14.51□□□□□ -0.09
SNX29-201ENST00000562510 ZBTB22O15209 634 aa14.48□□□□□ -0.09
SNX29-201ENST00000562510 MYCNP04198 464 aaPredicted RBP14.47□□□□□ -0.09
SNX29-201ENST00000562510 PABPN1Q86U42 306 aaKnown RBP eCLIP14.46□□□□□ -0.09
SNX29-201ENST00000562510 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
SNX29-201ENST00000562510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
SNX29-201ENST00000562510 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
SNX29-201ENST00000562510 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
SNX29-201ENST00000562510 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
SNX29-201ENST00000562510 SAMD1Q6SPF0 538 aaPredicted RBP14.38□□□□□ -0.11
SNX29-201ENST00000562510 APLP2Q06481 763 aa14.35□□□□□ -0.11
SNX29-201ENST00000562510 CAPN15O75808 1086 aa14.32□□□□□ -0.12
SNX29-201ENST00000562510 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
SNX29-201ENST00000562510 MYO15BQ96JP2 1530 aa14.29□□□□□ -0.12
SNX29-201ENST00000562510 DCAF1Q9Y4B6 1507 aa14.26□□□□□ -0.13
SNX29-201ENST00000562510 CSRNP3Q8WYN3 585 aa14.26□□□□□ -0.13
SNX29-201ENST00000562510 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
SNX29-201ENST00000562510 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
SNX29-201ENST00000562510 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
SNX29-201ENST00000562510 SHROOM4Q9ULL8 1493 aa14.11□□□□□ -0.15
SNX29-201ENST00000562510 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
SNX29-201ENST00000562510 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
SNX29-201ENST00000562510 ATXN8OSP0DMR3 200 aa14.05□□□□□ -0.16
SNX29-201ENST00000562510 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
SNX29-201ENST00000562510 ABCB7O75027 752 aa14.04□□□□□ -0.16
SNX29-201ENST00000562510 DSG3P32926 999 aa14.04□□□□□ -0.16
SNX29-201ENST00000562510 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
SNX29-201ENST00000562510 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
SNX29-201ENST00000562510 POLA2Q14181 598 aa13.9□□□□□ -0.18
SNX29-201ENST00000562510 EIF4G1Q04637 1599 aaKnown RBP13.88□□□□□ -0.19
SNX29-201ENST00000562510 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
SNX29-201ENST00000562510 ZBTB12Q9Y330 459 aaPredicted RBP13.66□□□□□ -0.22
SNX29-201ENST00000562510 FBLN2P98095 1184 aa13.56□□□□□ -0.24
SNX29-201ENST00000562510 CUX2O14529 1486 aa13.55□□□□□ -0.24
SNX29-201ENST00000562510 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
SNX29-201ENST00000562510 ERCC6Q03468 1493 aa13.45□□□□□ -0.26
SNX29-201ENST00000562510 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
SNX29-201ENST00000562510 MKRN4PQ13434 485 aaPredicted RBP13.43□□□□□ -0.26
SNX29-201ENST00000562510 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
SNX29-201ENST00000562510 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
SNX29-201ENST00000562510 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
SNX29-201ENST00000562510 RSF1Q96T23 1441 aaPredicted RBP13.32□□□□□ -0.28
SNX29-201ENST00000562510 BAZ1AQ9NRL2 1556 aaPredicted RBP13.29□□□□□ -0.28
SNX29-201ENST00000562510 MROH2BQ7Z745 1585 aa13.28□□□□□ -0.28
SNX29-201ENST00000562510 SMARCA2P51531 1590 aa13.27□□□□□ -0.29
SNX29-201ENST00000562510 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
SNX29-201ENST00000562510 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
SNX29-201ENST00000562510 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
SNX29-201ENST00000562510 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
SNX29-201ENST00000562510 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
SNX29-201ENST00000562510 NESP48681 1621 aa13.22□□□□□ -0.29
SNX29-201ENST00000562510 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
SNX29-201ENST00000562510 AKT1S1Q96B36 256 aa13.2□□□□□ -0.3
SNX29-201ENST00000562510 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
SNX29-201ENST00000562510 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
SNX29-201ENST00000562510 WIZO95785 1651 aa13.14□□□□□ -0.31
SNX29-201ENST00000562510 SPDYE4A6NLX3 237 aa13.11□□□□□ -0.31
SNX29-201ENST00000562510 TRIM41Q8WV44 630 aa13.11□□□□□ -0.31
SNX29-201ENST00000562510 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
SNX29-201ENST00000562510 LAMC3Q9Y6N6 1575 aa13.11□□□□□ -0.31
SNX29-201ENST00000562510 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
SNX29-201ENST00000562510 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
SNX29-201ENST00000562510 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
SNX29-201ENST00000562510 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
SNX29-201ENST00000562510 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms