RNA–Protein interactions for RNA: ENST00000478976.1

RAB3GAP2-207, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 4

Gene RAB3GAP2, Length 575 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-207ENST00000478976 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
RAB3GAP2-207ENST00000478976 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
RAB3GAP2-207ENST00000478976 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
RAB3GAP2-207ENST00000478976 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
RAB3GAP2-207ENST00000478976 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
RAB3GAP2-207ENST00000478976 PHF23Q9BUL5 403 aaPredicted RBP19.57■□□□□ 0.72
RAB3GAP2-207ENST00000478976 ZCCHC6Q5VYS8 1495 aaKnown RBP19.29■□□□□ 0.68
RAB3GAP2-207ENST00000478976 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
RAB3GAP2-207ENST00000478976 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
RAB3GAP2-207ENST00000478976 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
RAB3GAP2-207ENST00000478976 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
RAB3GAP2-207ENST00000478976 ABCC9O60706 1549 aa18.54■□□□□ 0.56
RAB3GAP2-207ENST00000478976 NACADO15069 1562 aa18.5■□□□□ 0.55
RAB3GAP2-207ENST00000478976 FOXD1Q16676 465 aa18.48■□□□□ 0.55
RAB3GAP2-207ENST00000478976 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
RAB3GAP2-207ENST00000478976 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
RAB3GAP2-207ENST00000478976 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
RAB3GAP2-207ENST00000478976 POTEDQ86YR6 584 aa17.96■□□□□ 0.47
RAB3GAP2-207ENST00000478976 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
RAB3GAP2-207ENST00000478976 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
RAB3GAP2-207ENST00000478976 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
RAB3GAP2-207ENST00000478976 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
RAB3GAP2-207ENST00000478976 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
RAB3GAP2-207ENST00000478976 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
RAB3GAP2-207ENST00000478976 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
RAB3GAP2-207ENST00000478976 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
RAB3GAP2-207ENST00000478976 WIZO95785 1651 aa17.55■□□□□ 0.4
RAB3GAP2-207ENST00000478976 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
RAB3GAP2-207ENST00000478976 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
RAB3GAP2-207ENST00000478976 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
RAB3GAP2-207ENST00000478976 MSH5O43196 834 aa17.38■□□□□ 0.37
RAB3GAP2-207ENST00000478976 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
RAB3GAP2-207ENST00000478976 EIF4G1Q04637 1599 aaKnown RBP17.26■□□□□ 0.35
RAB3GAP2-207ENST00000478976 SMARCA2P51531 1590 aa17.24■□□□□ 0.35
RAB3GAP2-207ENST00000478976 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
RAB3GAP2-207ENST00000478976 ATAD2BQ9ULI0 1458 aa17.19■□□□□ 0.34
RAB3GAP2-207ENST00000478976 ADRA2BP18089 450 aa17.16■□□□□ 0.34
RAB3GAP2-207ENST00000478976 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
RAB3GAP2-207ENST00000478976 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
RAB3GAP2-207ENST00000478976 HMGXB3Q12766 1538 aa17.08■□□□□ 0.32
RAB3GAP2-207ENST00000478976 NCAPD3P42695 1498 aa17.02■□□□□ 0.32
RAB3GAP2-207ENST00000478976 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
RAB3GAP2-207ENST00000478976 CC2D2AQ9P2K1 1620 aa16.86■□□□□ 0.29
RAB3GAP2-207ENST00000478976 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
RAB3GAP2-207ENST00000478976 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
RAB3GAP2-207ENST00000478976 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
RAB3GAP2-207ENST00000478976 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
RAB3GAP2-207ENST00000478976 CFTRP13569 1480 aa16.69■□□□□ 0.26
RAB3GAP2-207ENST00000478976 BIVM-ERCC5R4GMW8 1640 aa16.66■□□□□ 0.26
RAB3GAP2-207ENST00000478976 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
RAB3GAP2-207ENST00000478976 LOC105371045A0A1W2PR82 267 aa16.61■□□□□ 0.25
RAB3GAP2-207ENST00000478976 EEA1Q15075 1411 aa16.61■□□□□ 0.25
RAB3GAP2-207ENST00000478976 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
RAB3GAP2-207ENST00000478976 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
RAB3GAP2-207ENST00000478976 SOGA1O94964 1423 aa16.53■□□□□ 0.24
RAB3GAP2-207ENST00000478976 CUX1P39880 1505 aa16.52■□□□□ 0.24
RAB3GAP2-207ENST00000478976 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
RAB3GAP2-207ENST00000478976 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
RAB3GAP2-207ENST00000478976 KIF21BO75037 1637 aa16.45■□□□□ 0.22
RAB3GAP2-207ENST00000478976 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
RAB3GAP2-207ENST00000478976 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
RAB3GAP2-207ENST00000478976 GOLGA3Q08378 1498 aa16.36■□□□□ 0.21
RAB3GAP2-207ENST00000478976 NESP48681 1621 aa16.36■□□□□ 0.21
RAB3GAP2-207ENST00000478976 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
RAB3GAP2-207ENST00000478976 DNMBPQ6XZF7 1577 aa16.34■□□□□ 0.21
RAB3GAP2-207ENST00000478976 TNIKQ9UKE5 1360 aa16.32■□□□□ 0.2
RAB3GAP2-207ENST00000478976 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
RAB3GAP2-207ENST00000478976 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
RAB3GAP2-207ENST00000478976 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
RAB3GAP2-207ENST00000478976 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
RAB3GAP2-207ENST00000478976 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
RAB3GAP2-207ENST00000478976 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
RAB3GAP2-207ENST00000478976 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
RAB3GAP2-207ENST00000478976 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
RAB3GAP2-207ENST00000478976 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
RAB3GAP2-207ENST00000478976 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
RAB3GAP2-207ENST00000478976 WDR97A6NE52 1622 aa16.22■□□□□ 0.19
RAB3GAP2-207ENST00000478976 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
RAB3GAP2-207ENST00000478976 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
RAB3GAP2-207ENST00000478976 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
RAB3GAP2-207ENST00000478976 CUX2O14529 1486 aa16.18■□□□□ 0.18
RAB3GAP2-207ENST00000478976 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
RAB3GAP2-207ENST00000478976 UBTFP17480 764 aaKnown RBP16.12■□□□□ 0.17
RAB3GAP2-207ENST00000478976 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
RAB3GAP2-207ENST00000478976 ABCA5Q8WWZ7 1642 aa16.09■□□□□ 0.17
RAB3GAP2-207ENST00000478976 MRC2Q9UBG0 1479 aa16.08■□□□□ 0.16
RAB3GAP2-207ENST00000478976 CUL7Q14999 1698 aa16.08■□□□□ 0.16
RAB3GAP2-207ENST00000478976 IGF1RP08069 1367 aa16.07■□□□□ 0.16
RAB3GAP2-207ENST00000478976 CLIP1P30622 1438 aa16.07■□□□□ 0.16
RAB3GAP2-207ENST00000478976 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
RAB3GAP2-207ENST00000478976 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
RAB3GAP2-207ENST00000478976 WDR62O43379 1518 aa16.03■□□□□ 0.16
RAB3GAP2-207ENST00000478976 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
RAB3GAP2-207ENST00000478976 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
RAB3GAP2-207ENST00000478976 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
RAB3GAP2-207ENST00000478976 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
RAB3GAP2-207ENST00000478976 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
RAB3GAP2-207ENST00000478976 PBRM1Q86U86 1689 aa15.95■□□□□ 0.14
RAB3GAP2-207ENST00000478976 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
RAB3GAP2-207ENST00000478976 GAPVD1Q14C86 1478 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms