Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.42■□□□□ 0.22
SSSCA1O60232 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.42■□□□□ 0.22
SSSCA1O60232 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSSCA1O60232 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSSCA1O60232 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.41■□□□□ 0.22
SSSCA1O60232 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.41■□□□□ 0.22
SSSCA1O60232 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.41■□□□□ 0.22
SSSCA1O60232 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.41■□□□□ 0.22
SSSCA1O60232 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.41■□□□□ 0.22
SSSCA1O60232 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.41■□□□□ 0.22
SSSCA1O60232 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SSSCA1O60232 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
SSSCA1O60232 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.41■□□□□ 0.22
SSSCA1O60232 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.41■□□□□ 0.22
SSSCA1O60232 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSSCA1O60232 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.4■□□□□ 0.22
SSSCA1O60232 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
SSSCA1O60232 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.4■□□□□ 0.22
SSSCA1O60232 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
SSSCA1O60232 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.4■□□□□ 0.22
SSSCA1O60232 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.4■□□□□ 0.22
SSSCA1O60232 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SSSCA1O60232 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.4■□□□□ 0.22
SSSCA1O60232 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
SSSCA1O60232 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSSCA1O60232 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SSSCA1O60232 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
SSSCA1O60232 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.39■□□□□ 0.21
SSSCA1O60232 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SSSCA1O60232 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SSSCA1O60232 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SSSCA1O60232 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SSSCA1O60232 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SSSCA1O60232 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.39■□□□□ 0.21
SSSCA1O60232 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SSSCA1O60232 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SSSCA1O60232 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SSSCA1O60232 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SSSCA1O60232 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms