Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PRDM4Q9UKN5 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PRDM4Q9UKN5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
PRDM4Q9UKN5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 Z92544.1-202ENST00000571933 1220 ntBASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PRDM4Q9UKN5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 AC092850.2-201ENST00000623821 2697 ntBASIC20.81■□□□□ 0.92
PRDM4Q9UKN5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PRDM4Q9UKN5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM4Q9UKN5 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms