Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 AC009237.3-201ENST00000393279 1427 ntBASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SND1-IT1Q9HBX3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 GUSBP5-201ENST00000418136 578 ntBASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 TNXA-203ENST00000507684 2038 ntBASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 AC092720.2-201ENST00000602388 1665 ntBASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SND1-IT1Q9HBX3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 AL035685.1-201ENST00000636663 812 ntBASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 AC004408.2-201ENST00000623613 2777 ntBASIC13.49□□□□□ -0.25
SND1-IT1Q9HBX3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SND1-IT1Q9HBX3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms