Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 AC006455.2-201ENST00000429931 906 ntBASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 AL117332.1-201ENST00000622628 974 ntBASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 TREX1-205ENST00000625293 1783 ntBASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 AC120498.9-201ENST00000339021 3867 ntBASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LYSMD2Q8IV50 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 AL133373.2-201ENST00000623187 2828 ntBASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 KRT125P-201ENST00000546827 989 ntBASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 AL390961.4-201ENST00000623958 2535 ntBASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LYSMD2Q8IV50 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 AC010141.3-201ENST00000456659 717 ntBASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LYSMD2Q8IV50 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 AL034346.1-201ENST00000568244 1277 ntBASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 MIR4787-201ENST00000607364 84 ntBASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 AC087239.1-201ENST00000622671 572 ntBASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 TMEM179-206ENST00000616017 1645 ntBASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LYSMD2Q8IV50 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LYSMD2Q8IV50 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms