Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPRIN2Q6IMN6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CAPRIN2Q6IMN6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CAPRIN2Q6IMN6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.39■□□□□ 0.85
CAPRIN2Q6IMN6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CAPRIN2Q6IMN6 AC018445.3-201ENST00000624177 1945 ntBASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 AC007322.4-201ENST00000509611 723 ntBASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 AC013268.1-206ENST00000638368 961 ntBASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 AC112229.1-201ENST00000639295 961 ntBASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 Z98882.1-201ENST00000622160 2253 ntBASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.37■□□□□ 0.85
CAPRIN2Q6IMN6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CAPRIN2Q6IMN6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 AC007322.1-201ENST00000426983 750 ntBASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CAPRIN2Q6IMN6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPRIN2Q6IMN6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPRIN2Q6IMN6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPRIN2Q6IMN6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.34■□□□□ 0.85
CAPRIN2Q6IMN6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CAPRIN2Q6IMN6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms