Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC11.25□□□□□ -0.61
SEC61GP60059 EI24-212ENST00000615917 1407 ntTSL 2 BASIC11.25□□□□□ -0.61
SEC61GP60059 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.25□□□□□ -0.61
SEC61GP60059 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SEC61GP60059 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 LSR-205ENST00000427250 1606 ntTSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 SMG8-203ENST00000578922 2178 ntBASIC11.24□□□□□ -0.61
SEC61GP60059 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SEC61GP60059 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 AC092053.2-201ENST00000640557 1818 ntBASIC11.24□□□□□ -0.61
SEC61GP60059 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.24□□□□□ -0.61
SEC61GP60059 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SEC61GP60059 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SEC61GP60059 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SEC61GP60059 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 AC098818.2-201ENST00000564925 2320 ntBASIC11.23□□□□□ -0.61
SEC61GP60059 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SEC61GP60059 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SEC61GP60059 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SEC61GP60059 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SEC61GP60059 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
SEC61GP60059 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SEC61GP60059 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SEC61GP60059 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SEC61GP60059 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SEC61GP60059 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
SEC61GP60059 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC11.22□□□□□ -0.61
SEC61GP60059 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.22□□□□□ -0.61
SEC61GP60059 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms