Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS4P35443 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS4P35443 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.76■□□□□ 0.43
THBS4P35443 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
THBS4P35443 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS4P35443 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS4P35443 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS4P35443 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.76■□□□□ 0.43
THBS4P35443 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS4P35443 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
THBS4P35443 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
THBS4P35443 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
THBS4P35443 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.75■□□□□ 0.43
THBS4P35443 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
THBS4P35443 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.75■□□□□ 0.43
THBS4P35443 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.75■□□□□ 0.43
THBS4P35443 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.75■□□□□ 0.43
THBS4P35443 MIR4758-201ENST00000577688 71 ntBASIC17.75■□□□□ 0.43
THBS4P35443 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
THBS4P35443 AC116050.2-201ENST00000612102 1779 ntBASIC17.75■□□□□ 0.43
THBS4P35443 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
THBS4P35443 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
THBS4P35443 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
THBS4P35443 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
THBS4P35443 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.74■□□□□ 0.43
THBS4P35443 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.74■□□□□ 0.43
THBS4P35443 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.74■□□□□ 0.43
THBS4P35443 AC098934.4-201ENST00000564127 592 ntBASIC17.74■□□□□ 0.43
THBS4P35443 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.74■□□□□ 0.43
THBS4P35443 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
THBS4P35443 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
THBS4P35443 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.73■□□□□ 0.43
THBS4P35443 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 AL355472.2-201ENST00000422958 438 ntBASIC17.73■□□□□ 0.43
THBS4P35443 AC069152.1-201ENST00000438030 544 ntBASIC17.73■□□□□ 0.43
THBS4P35443 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.73■□□□□ 0.43
THBS4P35443 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.73■□□□□ 0.43
THBS4P35443 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
THBS4P35443 AC133041.1-202ENST00000642053 222 ntBASIC17.73■□□□□ 0.43
THBS4P35443 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.73■□□□□ 0.43
THBS4P35443 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.73■□□□□ 0.43
THBS4P35443 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
THBS4P35443 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
THBS4P35443 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.72■□□□□ 0.43
THBS4P35443 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
THBS4P35443 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms