Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PFAS-204ENST00000580251 559 ntTSL 315.93■□□□□ 0.142e-12■■□□□ 13
PRPF8Q6P2Q9 NECAB3-216ENST00000498353 597 ntTSL 314.98□□□□□ -0.015e-10■■□□□ 13
PRPF8Q6P2Q9 PFAS-203ENST00000578979 765 ntTSL 214.81□□□□□ -0.042e-12■■□□□ 13
PRPF8Q6P2Q9 QTRT1-204ENST00000587500 540 ntTSL 214.06□□□□□ -0.161e-8■■□□□ 13
PRPF8Q6P2Q9 PFAS-202ENST00000546020 2652 ntTSL 212.28□□□□□ -0.441e-8■■□□□ 13
PRPF8Q6P2Q9 RPA2-205ENST00000444045 682 ntTSL 511.99□□□□□ -0.491e-8■■□□□ 13
PRPF8Q6P2Q9 SACM1L-213ENST00000471207 534 ntTSL 39.68□□□□□ -0.861e-8■■□□□ 13
PRPF8Q6P2Q9 TOP3B-216ENST00000487485 725 ntTSL 39.23□□□□□ -0.931e-8■■□□□ 13
PRPF8Q6P2Q9 NOL9-202ENST00000460777 536 ntTSL 33.32□□□□□ -1.881e-8■■□□□ 13
PRPF8Q6P2Q9 ACTB-211ENST00000480301 657 ntTSL 1 (best)17.69■□□□□ 0.421e-13■■□□□ 13
PRPF8Q6P2Q9 CDIP1-214ENST00000589890 476 ntTSL 59.51□□□□□ -0.891e-7■■□□□ 13
PRPF8Q6P2Q9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.51e-6■■□□□ 13
PRPF8Q6P2Q9 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.511e-6■■□□□ 13
PRPF8Q6P2Q9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.611e-6■■□□□ 13
PRPF8Q6P2Q9 EMC9-205ENST00000559101 530 ntTSL 35.4□□□□□ -1.541e-7■■□□□ 13
PRPF8Q6P2Q9 STARD10-216ENST00000542989 839 ntTSL 317.15■□□□□ 0.346e-8■■□□□ 13
PRPF8Q6P2Q9 TRAPPC12-209ENST00000441099 698 ntTSL 313.29□□□□□ -0.282e-6■■□□□ 13
PRPF8Q6P2Q9 CRIM1-202ENST00000413985 874 ntTSL 310.05□□□□□ -0.83e-12■■□□□ 13
PRPF8Q6P2Q9 PACSIN3-208ENST00000531226 654 ntTSL 516.14■□□□□ 0.185e-7■■□□□ 13
PRPF8Q6P2Q9 PACSIN3-202ENST00000524509 554 ntTSL 314.63□□□□□ -0.075e-7■■□□□ 13
PRPF8Q6P2Q9 TUBB3-207ENST00000554927 561 ntTSL 211.83□□□□□ -0.513e-8■■□□□ 13
PRPF8Q6P2Q9 BUD23-215ENST00000471215 3886 ntTSL 27.78□□□□□ -1.163e-8■■□□□ 13
PRPF8Q6P2Q9 COMT-210ENST00000467943 546 ntTSL 220.31■□□□□ 0.842e-8■■□□□ 13
PRPF8Q6P2Q9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.18■□□□□ 0.822e-6■■□□□ 13
PRPF8Q6P2Q9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.06■□□□□ 0.82e-6■■□□□ 13
PRPF8Q6P2Q9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.322e-6■■□□□ 13
PRPF8Q6P2Q9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.462e-6■■□□□ 13
PRPF8Q6P2Q9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.54□□□□□ -0.562e-6■■□□□ 13
PRPF8Q6P2Q9 PABPC1L-215ENST00000489068 442 ntTSL 310.64□□□□□ -0.712e-6■■□□□ 13
PRPF8Q6P2Q9 PABPC1L-208ENST00000372826 854 ntTSL 58.48□□□□□ -1.052e-6■■□□□ 13
PRPF8Q6P2Q9 PABPC1L-206ENST00000372822 536 ntTSL 55.87□□□□□ -1.472e-6■■□□□ 13
PRPF8Q6P2Q9 ARRB1-205ENST00000529280 684 ntTSL 29.77□□□□□ -0.852e-6■■□□□ 13
PRPF8Q6P2Q9 AGAP1-209ENST00000453371 2138 ntTSL 513.56□□□□□ -0.242e-8■■□□□ 13
PRPF8Q6P2Q9 TDP2-205ENST00000480495 714 ntTSL 1 (best)12.77□□□□□ -0.362e-7■■□□□ 13
PRPF8Q6P2Q9 ZSWIM8-217ENST00000603409 842 ntTSL 510.33□□□□□ -0.761e-7■■□□□ 13
PRPF8Q6P2Q9 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.524e-6■■□□□ 13
PRPF8Q6P2Q9 POT1-207ENST00000461288 717 ntTSL 28.31□□□□□ -1.084e-7■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.941e-6■■□□□ 13
PRPF8Q6P2Q9 POLR3H-205ENST00000420561 517 ntTSL 420.85■□□□□ 0.932e-8■■□□□ 13
PRPF8Q6P2Q9 POLR3H-208ENST00000442616 553 ntTSL 520.76■□□□□ 0.912e-8■■□□□ 13
PRPF8Q6P2Q9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.755e-11■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.721e-6■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.581e-6■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-206ENST00000526779 881 ntTSL 517.02■□□□□ 0.311e-6■■□□□ 13
PRPF8Q6P2Q9 UBXN1-212ENST00000531625 542 ntTSL 216.93■□□□□ 0.36e-6■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.291e-6■■□□□ 13
PRPF8Q6P2Q9 NRDC-211ENST00000491410 1020 ntTSL 216.74■□□□□ 0.276e-19■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.5■□□□□ 0.231e-6■■□□□ 13
PRPF8Q6P2Q9 UBXN1-203ENST00000436354 592 ntTSL 216.13■□□□□ 0.176e-6■■□□□ 13
PRPF8Q6P2Q9 UBXN1-211ENST00000531056 560 ntTSL 416.13■□□□□ 0.176e-6■■□□□ 13
PRPF8Q6P2Q9 C14orf159-221ENST00000521334 909 ntTSL 315.9■□□□□ 0.147e-6■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.131e-6■■□□□ 13
PRPF8Q6P2Q9 UBXN1-216ENST00000533908 739 ntTSL 1 (best)15.74■□□□□ 0.116e-6■■□□□ 13
PRPF8Q6P2Q9 SLC52A2-204ENST00000526338 655 ntTSL 314.18□□□□□ -0.141e-6■■□□□ 13
PRPF8Q6P2Q9 GGA1-216ENST00000460957 790 ntTSL 213.39□□□□□ -0.271e-6■■□□□ 13
PRPF8Q6P2Q9 LGALS3BP-217ENST00000591274 379 ntTSL 513.08□□□□□ -0.315e-11■■□□□ 13
PRPF8Q6P2Q9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.485e-11■■□□□ 13
PRPF8Q6P2Q9 UBXN1-209ENST00000528907 861 ntTSL 211.88□□□□□ -0.516e-6■■□□□ 13
PRPF8Q6P2Q9 CCNL2-212ENST00000480646 614 ntTSL 311.53□□□□□ -0.565e-11■■□□□ 13
PRPF8Q6P2Q9 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.595e-11■■□□□ 13
PRPF8Q6P2Q9 TMEM63A-208ENST00000496025 789 ntTSL 211.28□□□□□ -0.65e-11■■□□□ 13
PRPF8Q6P2Q9 AC124319.4-201ENST00000622931 2161 ntBASIC11.02□□□□□ -0.658e-19■■□□□ 13
PRPF8Q6P2Q9 NLK-203ENST00000582037 1503 ntTSL 2 BASIC10.38□□□□□ -0.755e-11■■□□□ 13
PRPF8Q6P2Q9 NLK-204ENST00000583517 695 ntTSL 310.33□□□□□ -0.765e-11■■□□□ 13
PRPF8Q6P2Q9 C14orf159-222ENST00000522170 853 ntTSL 310.22□□□□□ -0.777e-6■■□□□ 13
PRPF8Q6P2Q9 C14orf159-214ENST00000519950 1060 ntTSL 39.94□□□□□ -0.827e-6■■□□□ 13
PRPF8Q6P2Q9 ADGRG6-206ENST00000435011 540 ntTSL 49.35□□□□□ -0.915e-11■■□□□ 13
PRPF8Q6P2Q9 C14orf159-215ENST00000519994 1148 ntTSL 1 (best)9.23□□□□□ -0.937e-6■■□□□ 13
PRPF8Q6P2Q9 NUP50-214ENST00000469163 3507 ntTSL 28.52□□□□□ -1.057e-6■■□□□ 13
PRPF8Q6P2Q9 CP-210ENST00000481169 3411 ntTSL 25.05□□□□□ -1.62e-6■■□□□ 13
PRPF8Q6P2Q9 C14orf159-209ENST00000518649 555 ntTSL 44.95□□□□□ -1.627e-6■■□□□ 13
PRPF8Q6P2Q9 CP-212ENST00000490639 3105 ntTSL 1 (best)4.52□□□□□ -1.692e-6■■□□□ 13
PRPF8Q6P2Q9 CP-213ENST00000494544 2806 ntTSL 1 (best)4.27□□□□□ -1.732e-6■■□□□ 13
PRPF8Q6P2Q9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.822e-6■■□□□ 13
PRPF8Q6P2Q9 OTUD3-202ENST00000466697 465 ntTSL 22.91□□□□□ -1.945e-11■■□□□ 13
PRPF8Q6P2Q9 MACF1-213ENST00000469490 842 ntTSL 52.3□□□□□ -2.045e-11■■□□□ 13
PRPF8Q6P2Q9 TRA2B-210ENST00000471134 724 ntTSL 50.56□□□□□ -2.325e-11■■□□□ 13
PRPF8Q6P2Q9 MSI2-207ENST00000579205 500 ntTSL 412.08□□□□□ -0.487e-12■■□□□ 13
PRPF8Q6P2Q9 TGFBI-213ENST00000514554 1691 ntTSL 512.44□□□□□ -0.423e-9■■□□□ 13
PRPF8Q6P2Q9 ATP6V0A1-224ENST00000592324 585 ntTSL 45.49□□□□□ -1.532e-9■■□□□ 13
PRPF8Q6P2Q9 ATAT1-210ENST00000479562 691 ntTSL 511.72□□□□□ -0.539e-7■■□□□ 13
PRPF8Q6P2Q9 CASP3-204ENST00000447121 549 ntTSL 311.31□□□□□ -0.65e-8■■□□□ 13
PRPF8Q6P2Q9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC11.31□□□□□ -0.65e-8■■□□□ 13
PRPF8Q6P2Q9 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.055e-8■■□□□ 13
PRPF8Q6P2Q9 CASP3-206ENST00000523916 2540 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.195e-8■■□□□ 13
PRPF8Q6P2Q9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.63□□□□□ -2.155e-8■■□□□ 13
PRPF8Q6P2Q9 TRIM8-203ENST00000479004 547 ntTSL 217.47■□□□□ 0.397e-10■■□□□ 13
PRPF8Q6P2Q9 ASPHD1-202ENST00000414952 1451 ntTSL 219.99■□□□□ 0.799e-9■■□□□ 13
PRPF8Q6P2Q9 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)19.86■□□□□ 0.779e-9■■□□□ 13
PRPF8Q6P2Q9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.219e-9■■□□□ 13
PRPF8Q6P2Q9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.219e-9■■□□□ 13
PRPF8Q6P2Q9 APOA2-208ENST00000481413 927 ntTSL 213.05□□□□□ -0.322e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.75□□□□□ -0.372e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-203ENST00000463812 401 ntTSL 2 BASIC8.01□□□□□ -1.132e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-202ENST00000463273 469 ntTSL 1 (best)7.69□□□□□ -1.182e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.752e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.64□□□□□ -1.832e-16■■□□□ 13
PRPF8Q6P2Q9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.62□□□□□ -1.992e-16■■□□□ 13
PRPF8Q6P2Q9 TJAP1-214ENST00000490050 942 ntTSL 1 (best)12.54□□□□□ -0.49e-8■■□□□ 13
PRPF8Q6P2Q9 EEF1D-244ENST00000532543 791 ntTSL 314.26□□□□□ -0.131e-26■■□□□ 13
Retrieved 100 of 73,762 protein–RNA pairs in 759 ms