RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 NISCHQ9Y2I1 1504 aa48.12■■■■■ 5.29
UBXN1-212ENST00000531625 ABCC9O60706 1549 aa43.48■■■■■ 4.55
UBXN1-212ENST00000531625 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
UBXN1-212ENST00000531625 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
UBXN1-212ENST00000531625 DNAJC5BQ9UF47 199 aa41.05■■■■■ 4.16
UBXN1-212ENST00000531625 NACADO15069 1562 aa40.99■■■■■ 4.15
UBXN1-212ENST00000531625 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
UBXN1-212ENST00000531625 PABPN1Q86U42 306 aaKnown RBP eCLIP40.45■■■■■ 4.07
UBXN1-212ENST00000531625 MYO15BQ96JP2 1530 aa40.41■■■■■ 4.06
UBXN1-212ENST00000531625 UNC13AQ9UPW8 1703 aa40.31■■■■■ 4.04
UBXN1-212ENST00000531625 BICRAQ9NZM4 1560 aa40.11■■■■■ 4.01
UBXN1-212ENST00000531625 ZCCHC6Q5VYS8 1495 aaKnown RBP39.81■■■■□ 3.96
UBXN1-212ENST00000531625 DCAF1Q9Y4B6 1507 aa39.78■■■■□ 3.96
UBXN1-212ENST00000531625 SHROOM4Q9ULL8 1493 aa39.63■■■■□ 3.94
UBXN1-212ENST00000531625 SCRIBQ14160 1630 aa39.35■■■■□ 3.89
UBXN1-212ENST00000531625 CC2D2AQ9P2K1 1620 aa39.27■■■■□ 3.88
UBXN1-212ENST00000531625 CECR2Q9BXF3 1484 aa39.23■■■■□ 3.87
UBXN1-212ENST00000531625 EIF4G1Q04637 1599 aaKnown RBP39.15■■■■□ 3.86
UBXN1-212ENST00000531625 DNAJC5Q9H3Z4 198 aa37.92■■■■□ 3.66
UBXN1-212ENST00000531625 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
UBXN1-212ENST00000531625 ATAD2BQ9ULI0 1458 aa37.7■■■■□ 3.63
UBXN1-212ENST00000531625 CUX2O14529 1486 aa37.64■■■■□ 3.62
UBXN1-212ENST00000531625 SMARCA2P51531 1590 aa37.58■■■■□ 3.61
UBXN1-212ENST00000531625 ERCC6Q03468 1493 aa37.57■■■■□ 3.6
UBXN1-212ENST00000531625 SMARCA4P51532 1647 aa37.56■■■■□ 3.6
UBXN1-212ENST00000531625 HMGXB3Q12766 1538 aa37.55■■■■□ 3.6
UBXN1-212ENST00000531625 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
UBXN1-212ENST00000531625 BAZ1BQ9UIG0 1483 aaKnown RBP37.29■■■■□ 3.56
UBXN1-212ENST00000531625 NESP48681 1621 aa37.28■■■■□ 3.56
UBXN1-212ENST00000531625 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
UBXN1-212ENST00000531625 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
UBXN1-212ENST00000531625 LAMC3Q9Y6N6 1575 aa37.02■■■■□ 3.52
UBXN1-212ENST00000531625 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
UBXN1-212ENST00000531625 PDS5BQ9NTI5 1447 aa36.85■■■■□ 3.49
UBXN1-212ENST00000531625 KIF21AQ7Z4S6 1674 aa36.76■■■■□ 3.47
UBXN1-212ENST00000531625 CADPSQ9ULU8 1353 aa36.7■■■■□ 3.47
UBXN1-212ENST00000531625 WIZO95785 1651 aa36.54■■■■□ 3.44
UBXN1-212ENST00000531625 MRC2Q9UBG0 1479 aa36.51■■■■□ 3.44
UBXN1-212ENST00000531625 WDR62O43379 1518 aa36.43■■■■□ 3.42
UBXN1-212ENST00000531625 CEP164Q9UPV0 1460 aa36.31■■■■□ 3.4
UBXN1-212ENST00000531625 FANCD2Q9BXW9 1451 aa36.25■■■■□ 3.39
UBXN1-212ENST00000531625 CFTRP13569 1480 aa36.23■■■■□ 3.39
UBXN1-212ENST00000531625 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
UBXN1-212ENST00000531625 TOP2AP11388 1531 aaKnown RBP36.12■■■■□ 3.37
UBXN1-212ENST00000531625 TRIM41Q8WV44 630 aa36.06■■■■□ 3.36
UBXN1-212ENST00000531625 URB2Q14146 1524 aaKnown RBP35.96■■■■□ 3.35
UBXN1-212ENST00000531625 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
UBXN1-212ENST00000531625 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
UBXN1-212ENST00000531625 CCDC88BA6NC98 1476 aa35.72■■■■□ 3.31
UBXN1-212ENST00000531625 IFT140Q96RY7 1462 aa35.61■■■■□ 3.29
UBXN1-212ENST00000531625 ZNF608Q9ULD9 1512 aaPredicted RBP35.55■■■■□ 3.28
UBXN1-212ENST00000531625 TOPBP1Q92547 1522 aa35.53■■■■□ 3.28
UBXN1-212ENST00000531625 ABCC8Q09428 1581 aa35.49■■■■□ 3.27
UBXN1-212ENST00000531625 RIMBP3CA6NJZ7 1639 aa35.38■■■■□ 3.25
UBXN1-212ENST00000531625 RIMBP3BA6NNM3 1639 aa35.38■■■■□ 3.25
UBXN1-212ENST00000531625 RIMBP3Q9UFD9 1639 aa35.38■■■■□ 3.25
UBXN1-212ENST00000531625 DNMBPQ6XZF7 1577 aa35.38■■■■□ 3.25
UBXN1-212ENST00000531625 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
UBXN1-212ENST00000531625 ARHGEF11O15085 1522 aa35.27■■■■□ 3.24
UBXN1-212ENST00000531625 TARBP1Q13395 1621 aaKnown RBP35.23■■■■□ 3.23
UBXN1-212ENST00000531625 AQRO60306 1485 aaKnown RBP eCLIP35.2■■■■□ 3.236e-9■■■■■ 45.1
UBXN1-212ENST00000531625 POLA1P09884 1462 aaPredicted RBP35.16■■■■□ 3.22
UBXN1-212ENST00000531625 CHD1O14646 1710 aa35.08■■■■□ 3.21
UBXN1-212ENST00000531625 CYB5RLQ6IPT4 315 aa35.02■■■■□ 3.2
UBXN1-212ENST00000531625 RAD54L2Q9Y4B4 1467 aa35.01■■■■□ 3.19
UBXN1-212ENST00000531625 SOGA1O94964 1423 aa35■■■■□ 3.19
UBXN1-212ENST00000531625 FBLN2P98095 1184 aa35■■■■□ 3.19
UBXN1-212ENST00000531625 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
UBXN1-212ENST00000531625 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
UBXN1-212ENST00000531625 WDR97A6NE52 1622 aa34.9■■■■□ 3.18
UBXN1-212ENST00000531625 FGD5Q6ZNL6 1462 aa34.89■■■■□ 3.18
UBXN1-212ENST00000531625 SNAPC4Q5SXM2 1469 aa34.83■■■■□ 3.17
UBXN1-212ENST00000531625 CUX1P39880 1505 aa34.82■■■■□ 3.16
UBXN1-212ENST00000531625 MAGI1Q96QZ7 1491 aaPredicted RBP34.77■■■■□ 3.16
UBXN1-212ENST00000531625 CHMP7Q8WUX9 453 aaPredicted RBP34.75■■■■□ 3.15
UBXN1-212ENST00000531625 CLASP1Q7Z460 1538 aa34.74■■■■□ 3.15
UBXN1-212ENST00000531625 GRIN2BQ13224 1484 aa34.73■■■■□ 3.15
UBXN1-212ENST00000531625 TRHP20396 242 aaPredicted RBP34.69■■■■□ 3.14
UBXN1-212ENST00000531625 SYNJ1O43426 1573 aa34.68■■■■□ 3.14
UBXN1-212ENST00000531625 SYNJ2O15056 1496 aa34.65■■■■□ 3.14
UBXN1-212ENST00000531625 GAPVD1Q14C86 1478 aa34.57■■■■□ 3.12
UBXN1-212ENST00000531625 ABCA10Q8WWZ4 1543 aa34.51■■■■□ 3.12
UBXN1-212ENST00000531625 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
UBXN1-212ENST00000531625 ABCA5Q8WWZ7 1642 aa34.44■■■■□ 3.1
UBXN1-212ENST00000531625 SUPT5HO00267 1087 aaKnown RBP34.36■■■■□ 3.09
UBXN1-212ENST00000531625 WRNQ14191 1432 aaPredicted RBP eCLIP34.33■■■■□ 3.09
UBXN1-212ENST00000531625 GRIN2AQ12879 1464 aa34.27■■■■□ 3.08
UBXN1-212ENST00000531625 TOP2BQ02880 1626 aa34.2■■■■□ 3.07
UBXN1-212ENST00000531625 NUP160Q12769 1436 aa34.2■■■■□ 3.06
UBXN1-212ENST00000531625 ADAMTS12P58397 1594 aa34.19■■■■□ 3.06
UBXN1-212ENST00000531625 BIVM-ERCC5R4GMW8 1640 aa34.19■■■■□ 3.06
UBXN1-212ENST00000531625 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
UBXN1-212ENST00000531625 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
UBXN1-212ENST00000531625 ERCC6L2Q5T890 1561 aa34.13■■■■□ 3.05
UBXN1-212ENST00000531625 ERICH3Q5RHP9 1530 aa34.08■■■■□ 3.05
UBXN1-212ENST00000531625 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
UBXN1-212ENST00000531625 AEBP2Q6ZN18 517 aaPredicted RBP33.87■■■■□ 3.01
UBXN1-212ENST00000531625 PRG4Q92954 1404 aaPredicted RBP33.87■■■■□ 3.01
UBXN1-212ENST00000531625 JPH4Q96JJ6 628 aa33.85■■■■□ 3.01
UBXN1-212ENST00000531625 RUSC2Q8N2Y8 1516 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 524.7 ms