RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 NISCHQ9Y2I1 1504 aa36.97■■■■□ 3.51
TDP2-205ENST00000480495 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
TDP2-205ENST00000480495 ABCC9O60706 1549 aa32.57■■■□□ 2.8
TDP2-205ENST00000480495 RB1CC1Q8TDY2 1594 aa31.22■■■□□ 2.59
TDP2-205ENST00000480495 NACADO15069 1562 aa31.12■■■□□ 2.57
TDP2-205ENST00000480495 DCAF8L2P0C7V8 631 aa31.02■■■□□ 2.56
TDP2-205ENST00000480495 MYO15BQ96JP2 1530 aa30.86■■■□□ 2.53
TDP2-205ENST00000480495 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
TDP2-205ENST00000480495 DCAF1Q9Y4B6 1507 aa30.6■■■□□ 2.49
TDP2-205ENST00000480495 UNC13AQ9UPW8 1703 aa30.41■■■□□ 2.46
TDP2-205ENST00000480495 PABPN1Q86U42 306 aaKnown RBP eCLIP30.4■■■□□ 2.46
TDP2-205ENST00000480495 BICRAQ9NZM4 1560 aa30.25■■■□□ 2.43
TDP2-205ENST00000480495 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
TDP2-205ENST00000480495 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
TDP2-205ENST00000480495 SHROOM4Q9ULL8 1493 aa29.99■■■□□ 2.39
TDP2-205ENST00000480495 EIF4G1Q04637 1599 aaKnown RBP29.5■■■□□ 2.31
TDP2-205ENST00000480495 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
TDP2-205ENST00000480495 CECR2Q9BXF3 1484 aa29.33■■■□□ 2.29
TDP2-205ENST00000480495 NCAPD3P42695 1498 aa28.74■■■□□ 2.19
TDP2-205ENST00000480495 SMARCA4P51532 1647 aa28.72■■■□□ 2.19
TDP2-205ENST00000480495 BAZ1AQ9NRL2 1556 aaPredicted RBP28.68■■■□□ 2.18
TDP2-205ENST00000480495 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
TDP2-205ENST00000480495 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
TDP2-205ENST00000480495 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
TDP2-205ENST00000480495 PEG3Q9GZU2 1588 aa28.48■■■□□ 2.15
TDP2-205ENST00000480495 MROH2BQ7Z745 1585 aa28.46■■■□□ 2.15
TDP2-205ENST00000480495 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
TDP2-205ENST00000480495 ERCC6Q03468 1493 aa28.13■■■□□ 2.09
TDP2-205ENST00000480495 WIZO95785 1651 aa28.11■■■□□ 2.09
TDP2-205ENST00000480495 NESP48681 1621 aa28.08■■■□□ 2.09
TDP2-205ENST00000480495 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
TDP2-205ENST00000480495 LAMC3Q9Y6N6 1575 aa28■■■□□ 2.07
TDP2-205ENST00000480495 CUX2O14529 1486 aa27.97■■■□□ 2.07
TDP2-205ENST00000480495 CADPSQ9ULU8 1353 aa27.88■■■□□ 2.05
TDP2-205ENST00000480495 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
TDP2-205ENST00000480495 TOP2AP11388 1531 aaKnown RBP27.83■■■□□ 2.05
TDP2-205ENST00000480495 THOC2Q8NI27 1593 aaKnown RBP27.73■■■□□ 2.03
TDP2-205ENST00000480495 KIF21AQ7Z4S6 1674 aa27.71■■■□□ 2.03
TDP2-205ENST00000480495 CFTRP13569 1480 aa27.64■■■□□ 2.02
TDP2-205ENST00000480495 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
TDP2-205ENST00000480495 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
TDP2-205ENST00000480495 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
TDP2-205ENST00000480495 CCDC88BA6NC98 1476 aa27.51■■■□□ 2
TDP2-205ENST00000480495 DNAJC5Q9H3Z4 198 aa27.49■■□□□ 1.99
TDP2-205ENST00000480495 WDR62O43379 1518 aa27.47■■□□□ 1.99
TDP2-205ENST00000480495 PRDM2Q13029 1718 aa27.32■■□□□ 1.96
TDP2-205ENST00000480495 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
TDP2-205ENST00000480495 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
TDP2-205ENST00000480495 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
TDP2-205ENST00000480495 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
TDP2-205ENST00000480495 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
TDP2-205ENST00000480495 IFT140Q96RY7 1462 aa26.99■■□□□ 1.91
TDP2-205ENST00000480495 ZNF608Q9ULD9 1512 aaPredicted RBP26.85■■□□□ 1.89
TDP2-205ENST00000480495 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
TDP2-205ENST00000480495 OSCARQ8IYS5 282 aa26.77■■□□□ 1.88
TDP2-205ENST00000480495 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
TDP2-205ENST00000480495 CUX1P39880 1505 aa26.72■■□□□ 1.87
TDP2-205ENST00000480495 SOGA1O94964 1423 aa26.72■■□□□ 1.87
TDP2-205ENST00000480495 EIF4G3O43432 1585 aaKnown RBP26.71■■□□□ 1.87
TDP2-205ENST00000480495 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
TDP2-205ENST00000480495 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.863e-6■■■□□ 15.7
TDP2-205ENST00000480495 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
TDP2-205ENST00000480495 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
TDP2-205ENST00000480495 WDR97A6NE52 1622 aa26.58■■□□□ 1.85
TDP2-205ENST00000480495 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.83
TDP2-205ENST00000480495 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
TDP2-205ENST00000480495 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
TDP2-205ENST00000480495 FBLN2P98095 1184 aa26.43■■□□□ 1.82
TDP2-205ENST00000480495 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
TDP2-205ENST00000480495 TOP2BQ02880 1626 aa26.42■■□□□ 1.82
TDP2-205ENST00000480495 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
TDP2-205ENST00000480495 CHD1O14646 1710 aa26.41■■□□□ 1.82
TDP2-205ENST00000480495 MAGI1Q96QZ7 1491 aaPredicted RBP26.4■■□□□ 1.82
TDP2-205ENST00000480495 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.82
TDP2-205ENST00000480495 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.82
TDP2-205ENST00000480495 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
TDP2-205ENST00000480495 CHMP7Q8WUX9 453 aaPredicted RBP26.34■■□□□ 1.81
TDP2-205ENST00000480495 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
TDP2-205ENST00000480495 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
TDP2-205ENST00000480495 RIMBP3CA6NJZ7 1639 aa26.3■■□□□ 1.8
TDP2-205ENST00000480495 RIMBP3BA6NNM3 1639 aa26.3■■□□□ 1.8
TDP2-205ENST00000480495 RIMBP3Q9UFD9 1639 aa26.3■■□□□ 1.8
TDP2-205ENST00000480495 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
TDP2-205ENST00000480495 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
TDP2-205ENST00000480495 CLASP1Q7Z460 1538 aa26.18■■□□□ 1.78
TDP2-205ENST00000480495 ERICH3Q5RHP9 1530 aa26.12■■□□□ 1.77
TDP2-205ENST00000480495 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
TDP2-205ENST00000480495 FHAD1B1AJZ9 1412 aa26.09■■□□□ 1.77
TDP2-205ENST00000480495 GRIN2AQ12879 1464 aa26.09■■□□□ 1.77
TDP2-205ENST00000480495 CYB5RLQ6IPT4 315 aa26.08■■□□□ 1.77
TDP2-205ENST00000480495 ARAP1Q96P48 1450 aa26.06■■□□□ 1.76
TDP2-205ENST00000480495 NUP160Q12769 1436 aa25.99■■□□□ 1.75
TDP2-205ENST00000480495 KIF27Q86VH2 1401 aa25.95■■□□□ 1.74
TDP2-205ENST00000480495 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
TDP2-205ENST00000480495 IGF1RP08069 1367 aa25.88■■□□□ 1.73
TDP2-205ENST00000480495 SHROOM2Q13796 1616 aa25.8■■□□□ 1.72
TDP2-205ENST00000480495 CUL7Q14999 1698 aa25.79■■□□□ 1.72
TDP2-205ENST00000480495 ERCC6L2Q5T890 1561 aa25.75■■□□□ 1.71
TDP2-205ENST00000480495 JPH4Q96JJ6 628 aa25.74■■□□□ 1.71
TDP2-205ENST00000480495 CARMIL1Q5VZK9 1371 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms