RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 NISCHQ9Y2I1 1504 aa33.57■■■□□ 2.96
TUBB3-207ENST00000554927 ABCC9O60706 1549 aa30.91■■■□□ 2.54
TUBB3-207ENST00000554927 CCDC180Q9P1Z9 1646 aa30.29■■■□□ 2.44
TUBB3-207ENST00000554927 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
TUBB3-207ENST00000554927 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
TUBB3-207ENST00000554927 NACADO15069 1562 aa28.79■■■□□ 2.2
TUBB3-207ENST00000554927 DCAF8L2P0C7V8 631 aa28.76■■■□□ 2.19
TUBB3-207ENST00000554927 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
TUBB3-207ENST00000554927 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
TUBB3-207ENST00000554927 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
TUBB3-207ENST00000554927 MYO15BQ96JP2 1530 aa28.18■■■□□ 2.1
TUBB3-207ENST00000554927 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
TUBB3-207ENST00000554927 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.04
TUBB3-207ENST00000554927 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
TUBB3-207ENST00000554927 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
TUBB3-207ENST00000554927 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
TUBB3-207ENST00000554927 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
TUBB3-207ENST00000554927 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
TUBB3-207ENST00000554927 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
TUBB3-207ENST00000554927 CUX2O14529 1486 aa26.8■■□□□ 1.88
TUBB3-207ENST00000554927 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
TUBB3-207ENST00000554927 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
TUBB3-207ENST00000554927 ATAD2BQ9ULI0 1458 aa26.46■■□□□ 1.83
TUBB3-207ENST00000554927 NESP48681 1621 aa26.38■■□□□ 1.81
TUBB3-207ENST00000554927 SMARCA2P51531 1590 aa26.36■■□□□ 1.81
TUBB3-207ENST00000554927 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
TUBB3-207ENST00000554927 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
TUBB3-207ENST00000554927 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
TUBB3-207ENST00000554927 THOC2Q8NI27 1593 aaKnown RBP26.15■■□□□ 1.78
TUBB3-207ENST00000554927 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
TUBB3-207ENST00000554927 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
TUBB3-207ENST00000554927 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
TUBB3-207ENST00000554927 PDS5BQ9NTI5 1447 aa26■■□□□ 1.75
TUBB3-207ENST00000554927 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
TUBB3-207ENST00000554927 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
TUBB3-207ENST00000554927 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
TUBB3-207ENST00000554927 CADPSQ9ULU8 1353 aa25.81■■□□□ 1.72
TUBB3-207ENST00000554927 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
TUBB3-207ENST00000554927 WDR62O43379 1518 aa25.7■■□□□ 1.7
TUBB3-207ENST00000554927 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
TUBB3-207ENST00000554927 OSCARQ8IYS5 282 aa25.56■■□□□ 1.68
TUBB3-207ENST00000554927 WIZO95785 1651 aa25.53■■□□□ 1.68
TUBB3-207ENST00000554927 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
TUBB3-207ENST00000554927 CFTRP13569 1480 aa25.37■■□□□ 1.65
TUBB3-207ENST00000554927 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
TUBB3-207ENST00000554927 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
TUBB3-207ENST00000554927 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
TUBB3-207ENST00000554927 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
TUBB3-207ENST00000554927 TOP2AP11388 1531 aaKnown RBP25.18■■□□□ 1.62
TUBB3-207ENST00000554927 RSF1Q96T23 1441 aaPredicted RBP25.17■■□□□ 1.62
TUBB3-207ENST00000554927 ZNF608Q9ULD9 1512 aaPredicted RBP25.1■■□□□ 1.61
TUBB3-207ENST00000554927 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
TUBB3-207ENST00000554927 ARHGEF11O15085 1522 aa25.09■■□□□ 1.61
TUBB3-207ENST00000554927 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
TUBB3-207ENST00000554927 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
TUBB3-207ENST00000554927 TRHP20396 242 aaPredicted RBP24.96■■□□□ 1.59
TUBB3-207ENST00000554927 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
TUBB3-207ENST00000554927 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
TUBB3-207ENST00000554927 EIF4G3O43432 1585 aaKnown RBP24.91■■□□□ 1.58
TUBB3-207ENST00000554927 FBLN2P98095 1184 aa24.88■■□□□ 1.57
TUBB3-207ENST00000554927 ABCC8Q09428 1581 aa24.87■■□□□ 1.57
TUBB3-207ENST00000554927 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.57
TUBB3-207ENST00000554927 DNMBPQ6XZF7 1577 aa24.81■■□□□ 1.56
TUBB3-207ENST00000554927 ARAP1Q96P48 1450 aa24.81■■□□□ 1.56
TUBB3-207ENST00000554927 CHD1O14646 1710 aa24.8■■□□□ 1.56
TUBB3-207ENST00000554927 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
TUBB3-207ENST00000554927 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
TUBB3-207ENST00000554927 TDRD9Q8NDG6 1382 aaKnown RBP24.63■■□□□ 1.53
TUBB3-207ENST00000554927 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
TUBB3-207ENST00000554927 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
TUBB3-207ENST00000554927 SOGA1O94964 1423 aa24.6■■□□□ 1.53
TUBB3-207ENST00000554927 CHMP7Q8WUX9 453 aaPredicted RBP24.57■■□□□ 1.52
TUBB3-207ENST00000554927 SNAPC4Q5SXM2 1469 aa24.57■■□□□ 1.52
TUBB3-207ENST00000554927 CLASP1Q7Z460 1538 aa24.51■■□□□ 1.51
TUBB3-207ENST00000554927 SYNJ1O43426 1573 aa24.49■■□□□ 1.51
TUBB3-207ENST00000554927 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
TUBB3-207ENST00000554927 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.5
TUBB3-207ENST00000554927 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
TUBB3-207ENST00000554927 GRIN2BQ13224 1484 aa24.42■■□□□ 1.5
TUBB3-207ENST00000554927 SYNJ2O15056 1496 aa24.38■■□□□ 1.49
TUBB3-207ENST00000554927 GAPVD1Q14C86 1478 aa24.34■■□□□ 1.49
TUBB3-207ENST00000554927 CUX1P39880 1505 aa24.34■■□□□ 1.49
TUBB3-207ENST00000554927 PBRM1Q86U86 1689 aa24.23■■□□□ 1.47
TUBB3-207ENST00000554927 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
TUBB3-207ENST00000554927 ERCC6L2Q5T890 1561 aa24.12■■□□□ 1.45
TUBB3-207ENST00000554927 ABCA5Q8WWZ7 1642 aa24.11■■□□□ 1.45
TUBB3-207ENST00000554927 GRIN2AQ12879 1464 aa24.09■■□□□ 1.45
TUBB3-207ENST00000554927 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
TUBB3-207ENST00000554927 NUP160Q12769 1436 aa24.01■■□□□ 1.43
TUBB3-207ENST00000554927 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
TUBB3-207ENST00000554927 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
TUBB3-207ENST00000554927 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
TUBB3-207ENST00000554927 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
TUBB3-207ENST00000554927 PRG4Q92954 1404 aaPredicted RBP23.88■■□□□ 1.41
TUBB3-207ENST00000554927 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
TUBB3-207ENST00000554927 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
TUBB3-207ENST00000554927 SUPT5HO00267 1087 aaKnown RBP23.83■■□□□ 1.41
TUBB3-207ENST00000554927 NPM1P06748 294 aaKnown RBP eCLIP23.83■■□□□ 1.41
TUBB3-207ENST00000554927 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
TUBB3-207ENST00000554927 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 285 ms