RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 NISCHQ9Y2I1 1504 aa46.4■■■■■ 5.02
UBXN1-203ENST00000436354 ABCC9O60706 1549 aa42.09■■■■■ 4.33
UBXN1-203ENST00000436354 CCDC180Q9P1Z9 1646 aa41.81■■■■■ 4.28
UBXN1-203ENST00000436354 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
UBXN1-203ENST00000436354 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
UBXN1-203ENST00000436354 NACADO15069 1562 aa39.61■■■■□ 3.93
UBXN1-203ENST00000436354 DCAF8L2P0C7V8 631 aa39.32■■■■□ 3.89
UBXN1-203ENST00000436354 PABPN1Q86U42 306 aaKnown RBP eCLIP39.13■■■■□ 3.85
UBXN1-203ENST00000436354 UNC13AQ9UPW8 1703 aa39.03■■■■□ 3.84
UBXN1-203ENST00000436354 MYO15BQ96JP2 1530 aa38.96■■■■□ 3.83
UBXN1-203ENST00000436354 BICRAQ9NZM4 1560 aa38.77■■■■□ 3.8
UBXN1-203ENST00000436354 ZCCHC6Q5VYS8 1495 aaKnown RBP38.38■■■■□ 3.73
UBXN1-203ENST00000436354 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
UBXN1-203ENST00000436354 SHROOM4Q9ULL8 1493 aa38.27■■■■□ 3.72
UBXN1-203ENST00000436354 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
UBXN1-203ENST00000436354 CC2D2AQ9P2K1 1620 aa38.01■■■■□ 3.68
UBXN1-203ENST00000436354 CECR2Q9BXF3 1484 aa37.96■■■■□ 3.67
UBXN1-203ENST00000436354 EIF4G1Q04637 1599 aaKnown RBP37.86■■■■□ 3.65
UBXN1-203ENST00000436354 DNAJC5Q9H3Z4 198 aa36.79■■■■□ 3.48
UBXN1-203ENST00000436354 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
UBXN1-203ENST00000436354 CUX2O14529 1486 aa36.43■■■■□ 3.42
UBXN1-203ENST00000436354 ERCC6Q03468 1493 aa36.39■■■■□ 3.42
UBXN1-203ENST00000436354 ATAD2BQ9ULI0 1458 aa36.38■■■■□ 3.41
UBXN1-203ENST00000436354 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
UBXN1-203ENST00000436354 SMARCA4P51532 1647 aa36.27■■■■□ 3.4
UBXN1-203ENST00000436354 HMGXB3Q12766 1538 aa36.26■■■■□ 3.4
UBXN1-203ENST00000436354 BAZ1AQ9NRL2 1556 aaPredicted RBP36.06■■■■□ 3.36
UBXN1-203ENST00000436354 NESP48681 1621 aa36.05■■■■□ 3.36
UBXN1-203ENST00000436354 BAZ1BQ9UIG0 1483 aaKnown RBP36.03■■■■□ 3.36
UBXN1-203ENST00000436354 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
UBXN1-203ENST00000436354 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
UBXN1-203ENST00000436354 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.32
UBXN1-203ENST00000436354 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
UBXN1-203ENST00000436354 PDS5BQ9NTI5 1447 aa35.6■■■■□ 3.29
UBXN1-203ENST00000436354 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
UBXN1-203ENST00000436354 CADPSQ9ULU8 1353 aa35.43■■■■□ 3.26
UBXN1-203ENST00000436354 MRC2Q9UBG0 1479 aa35.3■■■■□ 3.24
UBXN1-203ENST00000436354 WIZO95785 1651 aa35.3■■■■□ 3.24
UBXN1-203ENST00000436354 WDR62O43379 1518 aa35.22■■■■□ 3.23
UBXN1-203ENST00000436354 CEP164Q9UPV0 1460 aa35.1■■■■□ 3.21
UBXN1-203ENST00000436354 TRIM41Q8WV44 630 aa35.03■■■■□ 3.2
UBXN1-203ENST00000436354 FANCD2Q9BXW9 1451 aa35.02■■■■□ 3.2
UBXN1-203ENST00000436354 CFTRP13569 1480 aa34.96■■■■□ 3.19
UBXN1-203ENST00000436354 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
UBXN1-203ENST00000436354 TOP2AP11388 1531 aaKnown RBP34.84■■■■□ 3.17
UBXN1-203ENST00000436354 OSCARQ8IYS5 282 aa34.74■■■■□ 3.15
UBXN1-203ENST00000436354 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
UBXN1-203ENST00000436354 PRDM2Q13029 1718 aa34.6■■■■□ 3.13
UBXN1-203ENST00000436354 CCDC88BA6NC98 1476 aa34.44■■■■□ 3.1
UBXN1-203ENST00000436354 IFT140Q96RY7 1462 aa34.41■■■■□ 3.1
UBXN1-203ENST00000436354 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
UBXN1-203ENST00000436354 TOPBP1Q92547 1522 aa34.32■■■■□ 3.08
UBXN1-203ENST00000436354 RIMBP3CA6NJZ7 1639 aa34.3■■■■□ 3.08
UBXN1-203ENST00000436354 RIMBP3BA6NNM3 1639 aa34.3■■■■□ 3.08
UBXN1-203ENST00000436354 RIMBP3Q9UFD9 1639 aa34.3■■■■□ 3.08
UBXN1-203ENST00000436354 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
UBXN1-203ENST00000436354 DNMBPQ6XZF7 1577 aa34.18■■■■□ 3.06
UBXN1-203ENST00000436354 EIF4G3O43432 1585 aaKnown RBP34.17■■■■□ 3.06
UBXN1-203ENST00000436354 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
UBXN1-203ENST00000436354 TARBP1Q13395 1621 aaKnown RBP34.04■■■■□ 3.04
UBXN1-203ENST00000436354 AQRO60306 1485 aaKnown RBP eCLIP34.01■■■■□ 3.044e-9■■■■■ 30.4
UBXN1-203ENST00000436354 CHD1O14646 1710 aa33.99■■■■□ 3.03
UBXN1-203ENST00000436354 POLA1P09884 1462 aaPredicted RBP33.94■■■■□ 3.02
UBXN1-203ENST00000436354 CYB5RLQ6IPT4 315 aa33.93■■■■□ 3.02
UBXN1-203ENST00000436354 FBLN2P98095 1184 aa33.88■■■■□ 3.01
UBXN1-203ENST00000436354 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
UBXN1-203ENST00000436354 SOGA1O94964 1423 aa33.8■■■■□ 3
UBXN1-203ENST00000436354 ARAP1Q96P48 1450 aa33.77■■■■□ 3
UBXN1-203ENST00000436354 TDRD9Q8NDG6 1382 aaKnown RBP33.76■■■■□ 3
UBXN1-203ENST00000436354 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
UBXN1-203ENST00000436354 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
UBXN1-203ENST00000436354 TRHP20396 242 aaPredicted RBP33.68■■■□□ 2.98
UBXN1-203ENST00000436354 SNAPC4Q5SXM2 1469 aa33.66■■■□□ 2.98
UBXN1-203ENST00000436354 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
UBXN1-203ENST00000436354 CUX1P39880 1505 aa33.59■■■□□ 2.97
UBXN1-203ENST00000436354 MAGI1Q96QZ7 1491 aaPredicted RBP33.59■■■□□ 2.97
UBXN1-203ENST00000436354 CLASP1Q7Z460 1538 aa33.58■■■□□ 2.97
UBXN1-203ENST00000436354 SYNJ1O43426 1573 aa33.55■■■□□ 2.96
UBXN1-203ENST00000436354 GRIN2BQ13224 1484 aa33.55■■■□□ 2.96
UBXN1-203ENST00000436354 SYNJ2O15056 1496 aa33.48■■■□□ 2.95
UBXN1-203ENST00000436354 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
UBXN1-203ENST00000436354 GAPVD1Q14C86 1478 aa33.38■■■□□ 2.93
UBXN1-203ENST00000436354 ABCA10Q8WWZ4 1543 aa33.29■■■□□ 2.92
UBXN1-203ENST00000436354 ABCA5Q8WWZ7 1642 aa33.27■■■□□ 2.92
UBXN1-203ENST00000436354 WRNQ14191 1432 aaPredicted RBP eCLIP33.11■■■□□ 2.89
UBXN1-203ENST00000436354 GRIN2AQ12879 1464 aa33.11■■■□□ 2.89
UBXN1-203ENST00000436354 SUPT5HO00267 1087 aaKnown RBP33.1■■■□□ 2.89
UBXN1-203ENST00000436354 ADAMTS12P58397 1594 aa33.03■■■□□ 2.88
UBXN1-203ENST00000436354 NUP160Q12769 1436 aa33.01■■■□□ 2.87
UBXN1-203ENST00000436354 ERCC6L2Q5T890 1561 aa33■■■□□ 2.87
UBXN1-203ENST00000436354 TOP2BQ02880 1626 aa32.99■■■□□ 2.87
UBXN1-203ENST00000436354 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
UBXN1-203ENST00000436354 CEP170Q5SW79 1584 aa32.99■■■□□ 2.87
UBXN1-203ENST00000436354 FHAD1B1AJZ9 1412 aa32.95■■■□□ 2.87
UBXN1-203ENST00000436354 AEBP2Q6ZN18 517 aaPredicted RBP32.95■■■□□ 2.87
UBXN1-203ENST00000436354 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
UBXN1-203ENST00000436354 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
UBXN1-203ENST00000436354 PRG4Q92954 1404 aaPredicted RBP32.72■■■□□ 2.83
UBXN1-203ENST00000436354 JPH4Q96JJ6 628 aa32.69■■■□□ 2.82
UBXN1-203ENST00000436354 KIF13AQ9H1H9 1805 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms