RNA–Protein interactions for RNA: ENST00000466697.1

OTUD3-202, Transcript of OTU deubiquitinase 3, humanhuman

TSL 2

Gene OTUD3, Length 465 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-202ENST00000466697 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
OTUD3-202ENST00000466697 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
OTUD3-202ENST00000466697 SENP3Q9H4L4 574 aaPredicted RBP13.62□□□□□ -0.23
OTUD3-202ENST00000466697 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
OTUD3-202ENST00000466697 FOXD1Q16676 465 aa12.64□□□□□ -0.39
OTUD3-202ENST00000466697 PLPPR3Q6T4P5 718 aa11.98□□□□□ -0.49
OTUD3-202ENST00000466697 MSH5O43196 834 aa11.95□□□□□ -0.5
OTUD3-202ENST00000466697 PIAS4Q8N2W9 510 aaPredicted RBP11.83□□□□□ -0.52
OTUD3-202ENST00000466697 POTEDQ86YR6 584 aa11.76□□□□□ -0.53
OTUD3-202ENST00000466697 PPP6R1Q9UPN7 881 aa11.71□□□□□ -0.53
OTUD3-202ENST00000466697 ADRA2BP18089 450 aa11.69□□□□□ -0.54
OTUD3-202ENST00000466697 KCNA4P22459 653 aa10.92□□□□□ -0.66
OTUD3-202ENST00000466697 SCAF1Q9H7N4 1312 aaKnown RBP10.83□□□□□ -0.68
OTUD3-202ENST00000466697 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
OTUD3-202ENST00000466697 MAPK8IP2Q13387 824 aaPredicted RBP10.76□□□□□ -0.69
OTUD3-202ENST00000466697 DMRT2Q9Y5R5 561 aa10.75□□□□□ -0.69
OTUD3-202ENST00000466697 PPP4R3CPQ6ZMV5 832 aa10.55□□□□□ -0.72
OTUD3-202ENST00000466697 SLC4A1APQ9BWU0 796 aaKnown RBP10.47□□□□□ -0.73
OTUD3-202ENST00000466697 CSRNP3Q8WYN3 585 aa10.41□□□□□ -0.74
OTUD3-202ENST00000466697 NCBP3Q53F19 620 aaKnown RBP10.39□□□□□ -0.75
OTUD3-202ENST00000466697 DCAF8L1A6NGE4 600 aa10.36□□□□□ -0.75
OTUD3-202ENST00000466697 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
OTUD3-202ENST00000466697 CACNB1Q02641 598 aaPredicted RBP10.31□□□□□ -0.76
OTUD3-202ENST00000466697 CNKSR2Q8WXI2 1034 aa10.31□□□□□ -0.76
OTUD3-202ENST00000466697 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
OTUD3-202ENST00000466697 RNF216Q9NWF9 866 aaPredicted RBP10.24□□□□□ -0.77
OTUD3-202ENST00000466697 RNF39Q9H2S5 420 aa10.13□□□□□ -0.79
OTUD3-202ENST00000466697 ZBTB22O15209 634 aa10.07□□□□□ -0.8
OTUD3-202ENST00000466697 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
OTUD3-202ENST00000466697 DNAJC5BQ9UF47 199 aa10.02□□□□□ -0.81
OTUD3-202ENST00000466697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.88□□□□□ -0.83
OTUD3-202ENST00000466697 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
OTUD3-202ENST00000466697 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
OTUD3-202ENST00000466697 U3KPZ7 1027 aaPredicted RBP9.59□□□□□ -0.87
OTUD3-202ENST00000466697 CAPN15O75808 1086 aa9.53□□□□□ -0.88
OTUD3-202ENST00000466697 SPINK5Q9NQ38 1064 aaPredicted RBP9.47□□□□□ -0.89
OTUD3-202ENST00000466697 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
OTUD3-202ENST00000466697 DSG3P32926 999 aa9.46□□□□□ -0.9
OTUD3-202ENST00000466697 RTN4Q9NQC3 1192 aaKnown RBP9.46□□□□□ -0.9
OTUD3-202ENST00000466697 APLP2Q06481 763 aa9.45□□□□□ -0.9
OTUD3-202ENST00000466697 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
OTUD3-202ENST00000466697 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
OTUD3-202ENST00000466697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.4□□□□□ -0.9
OTUD3-202ENST00000466697 HNRNPUL2Q1KMD3 747 aaKnown RBP9.4□□□□□ -0.9
OTUD3-202ENST00000466697 FKBP8Q14318 412 aa9.38□□□□□ -0.91
OTUD3-202ENST00000466697 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
OTUD3-202ENST00000466697 TRHP20396 242 aaPredicted RBP9.35□□□□□ -0.91
OTUD3-202ENST00000466697 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
OTUD3-202ENST00000466697 SAMD1Q6SPF0 538 aaPredicted RBP9.31□□□□□ -0.92
OTUD3-202ENST00000466697 ABCB7O75027 752 aa9.26□□□□□ -0.93
OTUD3-202ENST00000466697 POTEHQ6S545 545 aa9.23□□□□□ -0.93
OTUD3-202ENST00000466697 ATF5Q9Y2D1 282 aaPredicted RBP9.23□□□□□ -0.93
OTUD3-202ENST00000466697 RBM42Q9BTD8 480 aaKnown RBP9.1□□□□□ -0.95
OTUD3-202ENST00000466697 POLA2Q14181 598 aa9.06□□□□□ -0.96
OTUD3-202ENST00000466697 ZBTB12Q9Y330 459 aaPredicted RBP8.93□□□□□ -0.98
OTUD3-202ENST00000466697 CHRDL2Q6WN34 429 aa8.89□□□□□ -0.99
OTUD3-202ENST00000466697 SPDYE4A6NLX3 237 aa8.87□□□□□ -0.99
OTUD3-202ENST00000466697 FBXO3Q9UK99 471 aa8.85□□□□□ -0.99
OTUD3-202ENST00000466697 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
OTUD3-202ENST00000466697 AKT1S1Q96B36 256 aa8.84□□□□□ -0.99
OTUD3-202ENST00000466697 PROM2Q8N271 834 aa8.77□□□□□ -1.01
OTUD3-202ENST00000466697 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
OTUD3-202ENST00000466697 FBLN2P98095 1184 aa8.75□□□□□ -1.01
OTUD3-202ENST00000466697 OSCARQ8IYS5 282 aa8.75□□□□□ -1.01
OTUD3-202ENST00000466697 REM2Q8IYK8 340 aaPredicted RBP8.73□□□□□ -1.01
OTUD3-202ENST00000466697 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
OTUD3-202ENST00000466697 IFNLR1Q8IU57 520 aaPredicted RBP8.69□□□□□ -1.02
OTUD3-202ENST00000466697 DCAF8L2P0C7V8 631 aa8.65□□□□□ -1.02
OTUD3-202ENST00000466697 PIP4P2Q8N4L2 257 aa8.63□□□□□ -1.03
OTUD3-202ENST00000466697 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
OTUD3-202ENST00000466697 SPDYE2BA6NHP3 402 aa8.61□□□□□ -1.03
OTUD3-202ENST00000466697 SPDYE6P0CI01 402 aa8.61□□□□□ -1.03
OTUD3-202ENST00000466697 SPDYE2Q495Y8 402 aa8.61□□□□□ -1.03
OTUD3-202ENST00000466697 SP7Q8TDD2 431 aaPredicted RBP8.61□□□□□ -1.03
OTUD3-202ENST00000466697 HAP1P54257 671 aaPredicted RBP8.6□□□□□ -1.03
OTUD3-202ENST00000466697 PKD2Q13563 968 aa8.6□□□□□ -1.03
OTUD3-202ENST00000466697 FXR2P51116 673 aaKnown RBP eCLIP8.58□□□□□ -1.04
OTUD3-202ENST00000466697 HAX1O00165 279 aa8.56□□□□□ -1.04
OTUD3-202ENST00000466697 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
OTUD3-202ENST00000466697 SPDYE1Q8NFV5 336 aaPredicted RBP8.5□□□□□ -1.05
OTUD3-202ENST00000466697 ZNF692Q9BU19 519 aaPredicted RBP8.5□□□□□ -1.05
OTUD3-202ENST00000466697 SPOCK2Q92563 424 aa8.48□□□□□ -1.05
OTUD3-202ENST00000466697 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
OTUD3-202ENST00000466697 ECM2O94769 699 aaPredicted RBP8.44□□□□□ -1.06
OTUD3-202ENST00000466697 SSUH2Q9Y2M2 353 aa8.44□□□□□ -1.06
OTUD3-202ENST00000466697 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
OTUD3-202ENST00000466697 PRKAR2AP13861 404 aaKnown RBP8.42□□□□□ -1.06
OTUD3-202ENST00000466697 BCANQ96GW7 911 aa8.42□□□□□ -1.06
OTUD3-202ENST00000466697 NPM1P06748 294 aaKnown RBP eCLIP8.41□□□□□ -1.06
OTUD3-202ENST00000466697 STAG3Q9UJ98 1225 aa8.41□□□□□ -1.06
OTUD3-202ENST00000466697 PLCD3Q8N3E9 789 aa8.4□□□□□ -1.06
OTUD3-202ENST00000466697 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
OTUD3-202ENST00000466697 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
OTUD3-202ENST00000466697 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
OTUD3-202ENST00000466697 PAXIP1Q6ZW49 1069 aaPredicted RBP8.37□□□□□ -1.07
OTUD3-202ENST00000466697 RGL2O15211 777 aa8.36□□□□□ -1.07
OTUD3-202ENST00000466697 MIER1Q8N108 512 aa8.36□□□□□ -1.07
OTUD3-202ENST00000466697 CFAP44Q96MT7 982 aa8.36□□□□□ -1.07
OTUD3-202ENST00000466697 PABPN1Q86U42 306 aaKnown RBP eCLIP8.35□□□□□ -1.07
OTUD3-202ENST00000466697 KDM2AQ9Y2K7 1162 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms