RNA–Protein interactions for RNA: ENST00000469490.1

MACF1-213, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-213ENST00000469490 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
MACF1-213ENST00000469490 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
MACF1-213ENST00000469490 SENP3Q9H4L4 574 aaPredicted RBP13.6□□□□□ -0.23
MACF1-213ENST00000469490 PHF23Q9BUL5 403 aaPredicted RBP13.53□□□□□ -0.24
MACF1-213ENST00000469490 FOXD1Q16676 465 aa12.66□□□□□ -0.38
MACF1-213ENST00000469490 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
MACF1-213ENST00000469490 ADRA2BP18089 450 aa12.07□□□□□ -0.48
MACF1-213ENST00000469490 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
MACF1-213ENST00000469490 POTEDQ86YR6 584 aa12.02□□□□□ -0.49
MACF1-213ENST00000469490 PIAS4Q8N2W9 510 aaPredicted RBP11.94□□□□□ -0.5
MACF1-213ENST00000469490 MSH5O43196 834 aa11.74□□□□□ -0.53
MACF1-213ENST00000469490 EHMT2Q96KQ7 1210 aa11.66□□□□□ -0.54
MACF1-213ENST00000469490 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
MACF1-213ENST00000469490 KCNA4P22459 653 aa11.17□□□□□ -0.62
MACF1-213ENST00000469490 CSRNP3Q8WYN3 585 aa11.04□□□□□ -0.64
MACF1-213ENST00000469490 SCAF1Q9H7N4 1312 aaKnown RBP11.04□□□□□ -0.64
MACF1-213ENST00000469490 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
MACF1-213ENST00000469490 PPP4R3CPQ6ZMV5 832 aa10.97□□□□□ -0.65
MACF1-213ENST00000469490 RTN4Q9NQC3 1192 aaKnown RBP10.81□□□□□ -0.68
MACF1-213ENST00000469490 DMRT2Q9Y5R5 561 aa10.8□□□□□ -0.68
MACF1-213ENST00000469490 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
MACF1-213ENST00000469490 AMER1Q5JTC6 1135 aaPredicted RBP10.72□□□□□ -0.69
MACF1-213ENST00000469490 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
MACF1-213ENST00000469490 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
MACF1-213ENST00000469490 DCAF8L1A6NGE4 600 aa10.55□□□□□ -0.72
MACF1-213ENST00000469490 RNF216Q9NWF9 866 aaPredicted RBP10.5□□□□□ -0.73
MACF1-213ENST00000469490 HOXD11P31277 338 aaPredicted RBP10.47□□□□□ -0.73
MACF1-213ENST00000469490 NPM3O75607 178 aaKnown RBP10.45□□□□□ -0.74
MACF1-213ENST00000469490 ZBTB22O15209 634 aa10.32□□□□□ -0.76
MACF1-213ENST00000469490 CACNB1Q02641 598 aaPredicted RBP10.22□□□□□ -0.77
MACF1-213ENST00000469490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.799e-7■■■□□ 14.6
MACF1-213ENST00000469490 RNF39Q9H2S5 420 aa10.02□□□□□ -0.81
MACF1-213ENST00000469490 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
MACF1-213ENST00000469490 DNAJC5BQ9UF47 199 aa9.99□□□□□ -0.81
MACF1-213ENST00000469490 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
MACF1-213ENST00000469490 FKBP8Q14318 412 aa9.92□□□□□ -0.82
MACF1-213ENST00000469490 C1QBPQ07021 282 aaKnown RBP9.9□□□□□ -0.82
MACF1-213ENST00000469490 SLC4A2P04920 1241 aa9.89□□□□□ -0.83
MACF1-213ENST00000469490 PLCB2Q00722 1185 aa9.86□□□□□ -0.83
MACF1-213ENST00000469490 BCANQ96GW7 911 aa9.85□□□□□ -0.83
MACF1-213ENST00000469490 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
MACF1-213ENST00000469490 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
MACF1-213ENST00000469490 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
MACF1-213ENST00000469490 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
MACF1-213ENST00000469490 CAPN15O75808 1086 aa9.71□□□□□ -0.86
MACF1-213ENST00000469490 TPRNQ4KMQ1 711 aa9.69□□□□□ -0.86
MACF1-213ENST00000469490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.68□□□□□ -0.86
MACF1-213ENST00000469490 HNRNPUL2Q1KMD3 747 aaKnown RBP9.68□□□□□ -0.86
MACF1-213ENST00000469490 SPINK5Q9NQ38 1064 aaPredicted RBP9.68□□□□□ -0.86
MACF1-213ENST00000469490 MYCNP04198 464 aaPredicted RBP9.66□□□□□ -0.86
MACF1-213ENST00000469490 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
MACF1-213ENST00000469490 APLP2Q06481 763 aa9.64□□□□□ -0.87
MACF1-213ENST00000469490 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
MACF1-213ENST00000469490 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
MACF1-213ENST00000469490 ARXQ96QS3 562 aa9.59□□□□□ -0.87
MACF1-213ENST00000469490 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
MACF1-213ENST00000469490 TULP1O00294 542 aaPredicted RBP9.53□□□□□ -0.88
MACF1-213ENST00000469490 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
MACF1-213ENST00000469490 ABCB7O75027 752 aa9.51□□□□□ -0.89
MACF1-213ENST00000469490 DSG3P32926 999 aa9.49□□□□□ -0.89
MACF1-213ENST00000469490 ATXN8OSP0DMR3 200 aa9.46□□□□□ -0.9
MACF1-213ENST00000469490 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
MACF1-213ENST00000469490 DCAF8L2P0C7V8 631 aa9.43□□□□□ -0.9
MACF1-213ENST00000469490 KDM2AQ9Y2K7 1162 aa9.4□□□□□ -0.9
MACF1-213ENST00000469490 POLA2Q14181 598 aa9.39□□□□□ -0.91
MACF1-213ENST00000469490 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
MACF1-213ENST00000469490 POTEHQ6S545 545 aa9.36□□□□□ -0.91
MACF1-213ENST00000469490 HOMEZQ8IX15 550 aa9.35□□□□□ -0.91
MACF1-213ENST00000469490 FBLN2P98095 1184 aa9.33□□□□□ -0.92
MACF1-213ENST00000469490 ERICH6Q7L0X2 663 aa9.29□□□□□ -0.92
MACF1-213ENST00000469490 FBXO3Q9UK99 471 aa9.21□□□□□ -0.94
MACF1-213ENST00000469490 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.2□□□□□ -0.94
MACF1-213ENST00000469490 TMEM132AQ24JP5 1023 aa9.18□□□□□ -0.94
MACF1-213ENST00000469490 PAXIP1Q6ZW49 1069 aaPredicted RBP9.18□□□□□ -0.94
MACF1-213ENST00000469490 PKD2Q13563 968 aa9.16□□□□□ -0.94
MACF1-213ENST00000469490 BBXQ8WY36 941 aaPredicted RBP9.16□□□□□ -0.94
MACF1-213ENST00000469490 CFAP44Q96MT7 982 aa9.16□□□□□ -0.94
MACF1-213ENST00000469490 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
MACF1-213ENST00000469490 VASPP50552 380 aaPredicted RBP9.13□□□□□ -0.95
MACF1-213ENST00000469490 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
MACF1-213ENST00000469490 RANGAP1P46060 587 aaPredicted RBP9.1□□□□□ -0.95
MACF1-213ENST00000469490 NBR1Q14596 966 aa9.1□□□□□ -0.95
MACF1-213ENST00000469490 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
MACF1-213ENST00000469490 NPM1P06748 294 aaKnown RBP eCLIP9.08□□□□□ -0.96
MACF1-213ENST00000469490 TSHZ2Q9NRE2 1034 aa9.08□□□□□ -0.96
MACF1-213ENST00000469490 RBM42Q9BTD8 480 aaKnown RBP9.06□□□□□ -0.96
MACF1-213ENST00000469490 OSCARQ8IYS5 282 aa9.04□□□□□ -0.96
MACF1-213ENST00000469490 PODXL2Q9NZ53 605 aa9.03□□□□□ -0.96
MACF1-213ENST00000469490 SPRYD3Q8NCJ5 442 aa8.99□□□□□ -0.97
MACF1-213ENST00000469490 MKRN4PQ13434 485 aaPredicted RBP8.98□□□□□ -0.97
MACF1-213ENST00000469490 SPDYE4A6NLX3 237 aa8.95□□□□□ -0.98
MACF1-213ENST00000469490 DNAJC5Q9H3Z4 198 aa8.94□□□□□ -0.98
MACF1-213ENST00000469490 ECM2O94769 699 aaPredicted RBP8.93□□□□□ -0.98
MACF1-213ENST00000469490 PROM2Q8N271 834 aa8.91□□□□□ -0.98
MACF1-213ENST00000469490 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
MACF1-213ENST00000469490 AKT1S1Q96B36 256 aa8.9□□□□□ -0.98
MACF1-213ENST00000469490 SUPT5HO00267 1087 aaKnown RBP8.89□□□□□ -0.99
MACF1-213ENST00000469490 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
MACF1-213ENST00000469490 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
MACF1-213ENST00000469490 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms