RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 NISCHQ9Y2I1 1504 aa41.76■■■■■ 4.28
PACSIN3-202ENST00000524509 ABCC9O60706 1549 aa38.15■■■■□ 3.7
PACSIN3-202ENST00000524509 CCDC180Q9P1Z9 1646 aa37.72■■■■□ 3.63
PACSIN3-202ENST00000524509 DNAJC5BQ9UF47 199 aa36.25■■■■□ 3.39
PACSIN3-202ENST00000524509 RB1CC1Q8TDY2 1594 aa36.15■■■■□ 3.38
PACSIN3-202ENST00000524509 NACADO15069 1562 aa35.78■■■■□ 3.32
PACSIN3-202ENST00000524509 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
PACSIN3-202ENST00000524509 DCAF8L2P0C7V8 631 aa35.39■■■■□ 3.26
PACSIN3-202ENST00000524509 UNC13AQ9UPW8 1703 aa35.31■■■■□ 3.24
PACSIN3-202ENST00000524509 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
PACSIN3-202ENST00000524509 BICRAQ9NZM4 1560 aa35.1■■■■□ 3.21
PACSIN3-202ENST00000524509 ZCCHC6Q5VYS8 1495 aaKnown RBP34.81■■■■□ 3.16
PACSIN3-202ENST00000524509 SHROOM4Q9ULL8 1493 aa34.64■■■■□ 3.14
PACSIN3-202ENST00000524509 DCAF1Q9Y4B6 1507 aa34.63■■■■□ 3.13
PACSIN3-202ENST00000524509 CC2D2AQ9P2K1 1620 aa34.47■■■■□ 3.11
PACSIN3-202ENST00000524509 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.1
PACSIN3-202ENST00000524509 EIF4G1Q04637 1599 aaKnown RBP34.28■■■■□ 3.08
PACSIN3-202ENST00000524509 SCRIBQ14160 1630 aa34.27■■■■□ 3.08
PACSIN3-202ENST00000524509 DNAJC5Q9H3Z4 198 aa33.71■■■□□ 2.99
PACSIN3-202ENST00000524509 CUX2O14529 1486 aa33.15■■■□□ 2.9
PACSIN3-202ENST00000524509 NCAPD3P42695 1498 aa33.05■■■□□ 2.88
PACSIN3-202ENST00000524509 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
PACSIN3-202ENST00000524509 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
PACSIN3-202ENST00000524509 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
PACSIN3-202ENST00000524509 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
PACSIN3-202ENST00000524509 SMARCA4P51532 1647 aa32.68■■■□□ 2.82
PACSIN3-202ENST00000524509 NESP48681 1621 aa32.63■■■□□ 2.81
PACSIN3-202ENST00000524509 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
PACSIN3-202ENST00000524509 BAZ1AQ9NRL2 1556 aaPredicted RBP32.45■■■□□ 2.79
PACSIN3-202ENST00000524509 THOC2Q8NI27 1593 aaKnown RBP32.44■■■□□ 2.78
PACSIN3-202ENST00000524509 PEG3Q9GZU2 1588 aa32.41■■■□□ 2.78
PACSIN3-202ENST00000524509 LAMC3Q9Y6N6 1575 aa32.38■■■□□ 2.77
PACSIN3-202ENST00000524509 KIF21AQ7Z4S6 1674 aa32.21■■■□□ 2.75
PACSIN3-202ENST00000524509 PDS5BQ9NTI5 1447 aa32.2■■■□□ 2.75
PACSIN3-202ENST00000524509 MROH2BQ7Z745 1585 aa32.15■■■□□ 2.74
PACSIN3-202ENST00000524509 CADPSQ9ULU8 1353 aa32■■■□□ 2.71
PACSIN3-202ENST00000524509 TRIM41Q8WV44 630 aa31.94■■■□□ 2.7
PACSIN3-202ENST00000524509 MRC2Q9UBG0 1479 aa31.94■■■□□ 2.7
PACSIN3-202ENST00000524509 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
PACSIN3-202ENST00000524509 WDR62O43379 1518 aa31.89■■■□□ 2.7
PACSIN3-202ENST00000524509 WIZO95785 1651 aa31.73■■■□□ 2.67
PACSIN3-202ENST00000524509 CEP164Q9UPV0 1460 aa31.71■■■□□ 2.67
PACSIN3-202ENST00000524509 FANCD2Q9BXW9 1451 aa31.62■■■□□ 2.65
PACSIN3-202ENST00000524509 OSCARQ8IYS5 282 aa31.54■■■□□ 2.64
PACSIN3-202ENST00000524509 CFTRP13569 1480 aa31.53■■■□□ 2.64
PACSIN3-202ENST00000524509 TOP2AP11388 1531 aaKnown RBP31.51■■■□□ 2.63
PACSIN3-202ENST00000524509 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
PACSIN3-202ENST00000524509 SUPT5HO00267 1087 aaKnown RBP31.38■■■□□ 2.61
PACSIN3-202ENST00000524509 PRDM2Q13029 1718 aa31.18■■■□□ 2.58
PACSIN3-202ENST00000524509 RIMBP3CA6NJZ7 1639 aa31.17■■■□□ 2.58
PACSIN3-202ENST00000524509 RIMBP3BA6NNM3 1639 aa31.17■■■□□ 2.58
PACSIN3-202ENST00000524509 RIMBP3Q9UFD9 1639 aa31.17■■■□□ 2.58
PACSIN3-202ENST00000524509 CCDC88BA6NC98 1476 aa31.13■■■□□ 2.57
PACSIN3-202ENST00000524509 IFT140Q96RY7 1462 aa31.1■■■□□ 2.57
PACSIN3-202ENST00000524509 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
PACSIN3-202ENST00000524509 ARHGEF11O15085 1522 aa31.03■■■□□ 2.56
PACSIN3-202ENST00000524509 TOPBP1Q92547 1522 aa30.97■■■□□ 2.55
PACSIN3-202ENST00000524509 ABCC8Q09428 1581 aa30.91■■■□□ 2.54
PACSIN3-202ENST00000524509 EIF4G3O43432 1585 aaKnown RBP30.89■■■□□ 2.54
PACSIN3-202ENST00000524509 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
PACSIN3-202ENST00000524509 CYB5RLQ6IPT4 315 aa30.8■■■□□ 2.52
PACSIN3-202ENST00000524509 CHD1O14646 1710 aa30.76■■■□□ 2.51
PACSIN3-202ENST00000524509 TARBP1Q13395 1621 aaKnown RBP30.74■■■□□ 2.51
PACSIN3-202ENST00000524509 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.514e-10■■■■□ 21.8
PACSIN3-202ENST00000524509 ARAP1Q96P48 1450 aa30.68■■■□□ 2.5
PACSIN3-202ENST00000524509 POLA1P09884 1462 aaPredicted RBP30.62■■■□□ 2.49
PACSIN3-202ENST00000524509 TRHP20396 242 aaPredicted RBP30.61■■■□□ 2.49
PACSIN3-202ENST00000524509 FBLN2P98095 1184 aa30.6■■■□□ 2.49
PACSIN3-202ENST00000524509 RAD54L2Q9Y4B4 1467 aa30.49■■■□□ 2.47
PACSIN3-202ENST00000524509 SOGA1O94964 1423 aa30.47■■■□□ 2.47
PACSIN3-202ENST00000524509 TDRD9Q8NDG6 1382 aaKnown RBP30.46■■■□□ 2.47
PACSIN3-202ENST00000524509 WDR97A6NE52 1622 aa30.44■■■□□ 2.46
PACSIN3-202ENST00000524509 CLASP1Q7Z460 1538 aa30.42■■■□□ 2.46
PACSIN3-202ENST00000524509 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
PACSIN3-202ENST00000524509 SYNJ1O43426 1573 aa30.34■■■□□ 2.45
PACSIN3-202ENST00000524509 FGD5Q6ZNL6 1462 aa30.34■■■□□ 2.45
PACSIN3-202ENST00000524509 MAGI1Q96QZ7 1491 aaPredicted RBP30.34■■■□□ 2.45
PACSIN3-202ENST00000524509 CHMP7Q8WUX9 453 aaPredicted RBP30.33■■■□□ 2.45
PACSIN3-202ENST00000524509 GRIN2BQ13224 1484 aa30.27■■■□□ 2.44
PACSIN3-202ENST00000524509 CUX1P39880 1505 aa30.24■■■□□ 2.43
PACSIN3-202ENST00000524509 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
PACSIN3-202ENST00000524509 WRNQ14191 1432 aaPredicted RBP eCLIP30.13■■■□□ 2.41
PACSIN3-202ENST00000524509 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
PACSIN3-202ENST00000524509 GAPVD1Q14C86 1478 aa30.11■■■□□ 2.41
PACSIN3-202ENST00000524509 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
PACSIN3-202ENST00000524509 ABCA10Q8WWZ4 1543 aa30■■■□□ 2.39
PACSIN3-202ENST00000524509 ABCA5Q8WWZ7 1642 aa29.99■■■□□ 2.39
PACSIN3-202ENST00000524509 TOP2BQ02880 1626 aa29.96■■■□□ 2.39
PACSIN3-202ENST00000524509 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
PACSIN3-202ENST00000524509 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
PACSIN3-202ENST00000524509 ERCC6L2Q5T890 1561 aa29.86■■■□□ 2.37
PACSIN3-202ENST00000524509 NUP160Q12769 1436 aa29.81■■■□□ 2.36
PACSIN3-202ENST00000524509 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
PACSIN3-202ENST00000524509 ADAMTS12P58397 1594 aa29.79■■■□□ 2.36
PACSIN3-202ENST00000524509 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
PACSIN3-202ENST00000524509 FHAD1B1AJZ9 1412 aa29.71■■■□□ 2.35
PACSIN3-202ENST00000524509 ERICH3Q5RHP9 1530 aa29.62■■■□□ 2.33
PACSIN3-202ENST00000524509 KIF13AQ9H1H9 1805 aa29.61■■■□□ 2.33
PACSIN3-202ENST00000524509 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
PACSIN3-202ENST00000524509 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms