RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
CRIM1-202ENST00000413985 ABCC9O60706 1549 aa26.84■■□□□ 1.89
CRIM1-202ENST00000413985 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
CRIM1-202ENST00000413985 CCDC180Q9P1Z9 1646 aa25.93■■□□□ 1.74
CRIM1-202ENST00000413985 RB1CC1Q8TDY2 1594 aa25.08■■□□□ 1.61
CRIM1-202ENST00000413985 PABPN1Q86U42 306 aaKnown RBP eCLIP24.87■■□□□ 1.57
CRIM1-202ENST00000413985 NACADO15069 1562 aa24.7■■□□□ 1.54
CRIM1-202ENST00000413985 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
CRIM1-202ENST00000413985 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
CRIM1-202ENST00000413985 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
CRIM1-202ENST00000413985 DNAJC5Q9H3Z4 198 aa24.28■■□□□ 1.48
CRIM1-202ENST00000413985 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
CRIM1-202ENST00000413985 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
CRIM1-202ENST00000413985 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
CRIM1-202ENST00000413985 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
CRIM1-202ENST00000413985 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
CRIM1-202ENST00000413985 SCRIBQ14160 1630 aa23.7■■□□□ 1.39
CRIM1-202ENST00000413985 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
CRIM1-202ENST00000413985 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
CRIM1-202ENST00000413985 CUX2O14529 1486 aa23.35■■□□□ 1.33
CRIM1-202ENST00000413985 ERCC6Q03468 1493 aa23.16■■□□□ 1.3
CRIM1-202ENST00000413985 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
CRIM1-202ENST00000413985 NESP48681 1621 aa22.86■■□□□ 1.25
CRIM1-202ENST00000413985 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
CRIM1-202ENST00000413985 THOC2Q8NI27 1593 aaKnown RBP22.74■■□□□ 1.23
CRIM1-202ENST00000413985 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
CRIM1-202ENST00000413985 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
CRIM1-202ENST00000413985 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
CRIM1-202ENST00000413985 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
CRIM1-202ENST00000413985 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
CRIM1-202ENST00000413985 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
CRIM1-202ENST00000413985 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
CRIM1-202ENST00000413985 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
CRIM1-202ENST00000413985 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
CRIM1-202ENST00000413985 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
CRIM1-202ENST00000413985 WDR62O43379 1518 aa22.21■■□□□ 1.15
CRIM1-202ENST00000413985 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
CRIM1-202ENST00000413985 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
CRIM1-202ENST00000413985 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
CRIM1-202ENST00000413985 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
CRIM1-202ENST00000413985 RIMBP3CA6NJZ7 1639 aa22.04■■□□□ 1.12
CRIM1-202ENST00000413985 RIMBP3BA6NNM3 1639 aa22.04■■□□□ 1.12
CRIM1-202ENST00000413985 RIMBP3Q9UFD9 1639 aa22.04■■□□□ 1.12
CRIM1-202ENST00000413985 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
CRIM1-202ENST00000413985 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
CRIM1-202ENST00000413985 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
CRIM1-202ENST00000413985 URB2Q14146 1524 aaKnown RBP21.8■■□□□ 1.08
CRIM1-202ENST00000413985 WIZO95785 1651 aa21.78■■□□□ 1.08
CRIM1-202ENST00000413985 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
CRIM1-202ENST00000413985 CYB5RLQ6IPT4 315 aa21.75■■□□□ 1.07
CRIM1-202ENST00000413985 CFTRP13569 1480 aa21.7■■□□□ 1.06
CRIM1-202ENST00000413985 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
CRIM1-202ENST00000413985 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
CRIM1-202ENST00000413985 ARAP1Q96P48 1450 aa21.63■■□□□ 1.05
CRIM1-202ENST00000413985 IFT140Q96RY7 1462 aa21.53■■□□□ 1.04
CRIM1-202ENST00000413985 CHD1O14646 1710 aa21.5■■□□□ 1.03
CRIM1-202ENST00000413985 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
CRIM1-202ENST00000413985 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
CRIM1-202ENST00000413985 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
CRIM1-202ENST00000413985 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
CRIM1-202ENST00000413985 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
CRIM1-202ENST00000413985 AQRO60306 1485 aaKnown RBP eCLIP21.37■■□□□ 1.01
CRIM1-202ENST00000413985 FBLN2P98095 1184 aa21.36■■□□□ 1.01
CRIM1-202ENST00000413985 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
CRIM1-202ENST00000413985 DNMBPQ6XZF7 1577 aa21.22■□□□□ 0.99
CRIM1-202ENST00000413985 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
CRIM1-202ENST00000413985 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
CRIM1-202ENST00000413985 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
CRIM1-202ENST00000413985 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
CRIM1-202ENST00000413985 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
CRIM1-202ENST00000413985 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
CRIM1-202ENST00000413985 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
CRIM1-202ENST00000413985 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
CRIM1-202ENST00000413985 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
CRIM1-202ENST00000413985 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
CRIM1-202ENST00000413985 SOGA1O94964 1423 aa20.99■□□□□ 0.95
CRIM1-202ENST00000413985 MAGI1Q96QZ7 1491 aaPredicted RBP20.95■□□□□ 0.94
CRIM1-202ENST00000413985 ILDR1Q86SU0 546 aaPredicted RBP20.92■□□□□ 0.94
CRIM1-202ENST00000413985 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
CRIM1-202ENST00000413985 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
CRIM1-202ENST00000413985 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
CRIM1-202ENST00000413985 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
CRIM1-202ENST00000413985 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
CRIM1-202ENST00000413985 KIF13AQ9H1H9 1805 aa20.82■□□□□ 0.92
CRIM1-202ENST00000413985 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
CRIM1-202ENST00000413985 CUX1P39880 1505 aa20.77■□□□□ 0.92
CRIM1-202ENST00000413985 KDM4FA0A1W2PPD8 638 aa20.73■□□□□ 0.91
CRIM1-202ENST00000413985 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
CRIM1-202ENST00000413985 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
CRIM1-202ENST00000413985 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
CRIM1-202ENST00000413985 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
CRIM1-202ENST00000413985 NUP160Q12769 1436 aa20.6■□□□□ 0.89
CRIM1-202ENST00000413985 FAM69CQ0P6D2 419 aa20.58■□□□□ 0.89
CRIM1-202ENST00000413985 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
CRIM1-202ENST00000413985 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
CRIM1-202ENST00000413985 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
CRIM1-202ENST00000413985 KDM6BO15054 1643 aa20.53■□□□□ 0.88
CRIM1-202ENST00000413985 DIP2BQ9P265 1576 aa20.51■□□□□ 0.87
CRIM1-202ENST00000413985 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
CRIM1-202ENST00000413985 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms