RNA–Protein interactions for RNA: ENST00000460957.1

GGA1-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 790 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-216ENST00000460957 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
GGA1-216ENST00000460957 CCDC180Q9P1Z9 1646 aa34.32■■■■□ 3.08
GGA1-216ENST00000460957 ABCC9O60706 1549 aa33.72■■■□□ 2.99
GGA1-216ENST00000460957 DCAF8L2P0C7V8 631 aa32.43■■■□□ 2.78
GGA1-216ENST00000460957 RB1CC1Q8TDY2 1594 aa32.4■■■□□ 2.78
GGA1-216ENST00000460957 NACADO15069 1562 aa32.28■■■□□ 2.76
GGA1-216ENST00000460957 ZCCHC6Q5VYS8 1495 aaKnown RBP32.03■■■□□ 2.72
GGA1-216ENST00000460957 MYO15BQ96JP2 1530 aa31.97■■■□□ 2.71
GGA1-216ENST00000460957 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
GGA1-216ENST00000460957 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
GGA1-216ENST00000460957 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.632e-9■□□□□ 9.9
GGA1-216ENST00000460957 SCRIBQ14160 1630 aa31.35■■■□□ 2.61
GGA1-216ENST00000460957 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
GGA1-216ENST00000460957 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
GGA1-216ENST00000460957 DNAJC5BQ9UF47 199 aa30.92■■■□□ 2.54
GGA1-216ENST00000460957 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
GGA1-216ENST00000460957 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
GGA1-216ENST00000460957 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
GGA1-216ENST00000460957 SMARCA4P51532 1647 aa29.93■■■□□ 2.38
GGA1-216ENST00000460957 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
GGA1-216ENST00000460957 SMARCA2P51531 1590 aa29.78■■■□□ 2.36
GGA1-216ENST00000460957 ATAD2BQ9ULI0 1458 aa29.76■■■□□ 2.35
GGA1-216ENST00000460957 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
GGA1-216ENST00000460957 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
GGA1-216ENST00000460957 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
GGA1-216ENST00000460957 BAZ1BQ9UIG0 1483 aaKnown RBP29.59■■■□□ 2.33
GGA1-216ENST00000460957 PEG3Q9GZU2 1588 aa29.56■■■□□ 2.32
GGA1-216ENST00000460957 WIZO95785 1651 aa29.39■■■□□ 2.3
GGA1-216ENST00000460957 RSF1Q96T23 1441 aaPredicted RBP29.27■■■□□ 2.28
GGA1-216ENST00000460957 ERCC6Q03468 1493 aa29.16■■■□□ 2.26
GGA1-216ENST00000460957 NESP48681 1621 aa29.09■■■□□ 2.25
GGA1-216ENST00000460957 TOP2AP11388 1531 aaKnown RBP29.06■■■□□ 2.24
GGA1-216ENST00000460957 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
GGA1-216ENST00000460957 CADPSQ9ULU8 1353 aa28.91■■■□□ 2.22
GGA1-216ENST00000460957 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
GGA1-216ENST00000460957 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
GGA1-216ENST00000460957 CUX2O14529 1486 aa28.78■■■□□ 2.2
GGA1-216ENST00000460957 CCDC88BA6NC98 1476 aa28.7■■■□□ 2.18
GGA1-216ENST00000460957 CFTRP13569 1480 aa28.68■■■□□ 2.18
GGA1-216ENST00000460957 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
GGA1-216ENST00000460957 SUPT5HO00267 1087 aaKnown RBP28.63■■■□□ 2.17
GGA1-216ENST00000460957 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
GGA1-216ENST00000460957 CEP164Q9UPV0 1460 aa28.61■■■□□ 2.17
GGA1-216ENST00000460957 MRC2Q9UBG0 1479 aa28.57■■■□□ 2.16
GGA1-216ENST00000460957 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
GGA1-216ENST00000460957 WDR62O43379 1518 aa28.43■■■□□ 2.14
GGA1-216ENST00000460957 URB2Q14146 1524 aaKnown RBP28.28■■■□□ 2.12
GGA1-216ENST00000460957 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
GGA1-216ENST00000460957 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
GGA1-216ENST00000460957 DNMBPQ6XZF7 1577 aa28.1■■■□□ 2.09
GGA1-216ENST00000460957 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
GGA1-216ENST00000460957 IFT140Q96RY7 1462 aa27.99■■■□□ 2.07
GGA1-216ENST00000460957 POLA1P09884 1462 aaPredicted RBP27.86■■■□□ 2.05
GGA1-216ENST00000460957 CUX1P39880 1505 aa27.84■■■□□ 2.05
GGA1-216ENST00000460957 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
GGA1-216ENST00000460957 FGD5Q6ZNL6 1462 aa27.81■■■□□ 2.04
GGA1-216ENST00000460957 SOGA1O94964 1423 aa27.8■■■□□ 2.04
GGA1-216ENST00000460957 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
GGA1-216ENST00000460957 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
GGA1-216ENST00000460957 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
GGA1-216ENST00000460957 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
GGA1-216ENST00000460957 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.02
GGA1-216ENST00000460957 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
GGA1-216ENST00000460957 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
GGA1-216ENST00000460957 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
GGA1-216ENST00000460957 TOP2BQ02880 1626 aa27.6■■■□□ 2.01
GGA1-216ENST00000460957 BIVM-ERCC5R4GMW8 1640 aa27.59■■■□□ 2.01
GGA1-216ENST00000460957 SYNJ1O43426 1573 aa27.57■■■□□ 2
GGA1-216ENST00000460957 FBLN2P98095 1184 aa27.53■■■□□ 2
GGA1-216ENST00000460957 ABCA10Q8WWZ4 1543 aa27.51■■□□□ 1.99
GGA1-216ENST00000460957 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
GGA1-216ENST00000460957 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
GGA1-216ENST00000460957 CHD1O14646 1710 aa27.47■■□□□ 1.99
GGA1-216ENST00000460957 SNAPC4Q5SXM2 1469 aa27.45■■□□□ 1.99
GGA1-216ENST00000460957 PBRM1Q86U86 1689 aa27.45■■□□□ 1.98
GGA1-216ENST00000460957 MAGI1Q96QZ7 1491 aaPredicted RBP27.4■■□□□ 1.98
GGA1-216ENST00000460957 ABCA5Q8WWZ7 1642 aa27.4■■□□□ 1.98
GGA1-216ENST00000460957 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
GGA1-216ENST00000460957 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
GGA1-216ENST00000460957 TRIM41Q8WV44 630 aa27.2■■□□□ 1.94
GGA1-216ENST00000460957 ERICH3Q5RHP9 1530 aa27.2■■□□□ 1.94
GGA1-216ENST00000460957 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
GGA1-216ENST00000460957 RIMBP3CA6NJZ7 1639 aa27.16■■□□□ 1.94
GGA1-216ENST00000460957 RIMBP3BA6NNM3 1639 aa27.16■■□□□ 1.94
GGA1-216ENST00000460957 RIMBP3Q9UFD9 1639 aa27.16■■□□□ 1.94
GGA1-216ENST00000460957 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
GGA1-216ENST00000460957 KIF27Q86VH2 1401 aa27.14■■□□□ 1.93
GGA1-216ENST00000460957 ARHGEF11O15085 1522 aa27.12■■□□□ 1.93
GGA1-216ENST00000460957 GRIN2AQ12879 1464 aa27.11■■□□□ 1.93
GGA1-216ENST00000460957 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
GGA1-216ENST00000460957 CUL7Q14999 1698 aa26.98■■□□□ 1.91
GGA1-216ENST00000460957 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
GGA1-216ENST00000460957 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
GGA1-216ENST00000460957 IGF1RP08069 1367 aa26.95■■□□□ 1.9
GGA1-216ENST00000460957 NUP160Q12769 1436 aa26.94■■□□□ 1.9
GGA1-216ENST00000460957 ARAP1Q96P48 1450 aa26.87■■□□□ 1.89
GGA1-216ENST00000460957 CARMIL1Q5VZK9 1371 aa26.85■■□□□ 1.89
GGA1-216ENST00000460957 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
GGA1-216ENST00000460957 SHROOM2Q13796 1616 aa26.76■■□□□ 1.87
GGA1-216ENST00000460957 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms