Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHCHD1Q96BP2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHCHD1Q96BP2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 MIR6722-201ENST00000617286 78 ntBASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHCHD1Q96BP2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 AC011484.1-201ENST00000377652 1995 ntBASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 LINC01465-201ENST00000408887 1940 ntBASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHCHD1Q96BP2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 AL032819.2-201ENST00000624543 2162 ntBASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 AC009102.2-201ENST00000606772 1639 ntBASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 TREX1-205ENST00000625293 1783 ntBASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHCHD1Q96BP2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms