Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.33■□□□□ 0.68
GABREP78334 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GABREP78334 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.33■□□□□ 0.68
GABREP78334 RN7SL850P-201ENST00000579959 291 ntBASIC19.33■□□□□ 0.68
GABREP78334 AL353708.3-201ENST00000610272 989 ntBASIC19.33■□□□□ 0.68
GABREP78334 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
GABREP78334 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
GABREP78334 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GABREP78334 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.33■□□□□ 0.68
GABREP78334 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GABREP78334 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
GABREP78334 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
GABREP78334 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.32■□□□□ 0.68
GABREP78334 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.32■□□□□ 0.68
GABREP78334 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.32■□□□□ 0.68
GABREP78334 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.32■□□□□ 0.68
GABREP78334 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABREP78334 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
GABREP78334 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
GABREP78334 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
GABREP78334 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.31■□□□□ 0.68
GABREP78334 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.31■□□□□ 0.68
GABREP78334 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.31■□□□□ 0.68
GABREP78334 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GABREP78334 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.31■□□□□ 0.68
GABREP78334 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.31■□□□□ 0.68
GABREP78334 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABREP78334 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.3■□□□□ 0.68
GABREP78334 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.3■□□□□ 0.68
GABREP78334 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 MMP23A-201ENST00000234610 1017 ntBASIC19.3■□□□□ 0.68
GABREP78334 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GABREP78334 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.3■□□□□ 0.68
GABREP78334 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.3■□□□□ 0.68
GABREP78334 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
GABREP78334 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
GABREP78334 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.3■□□□□ 0.68
GABREP78334 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABREP78334 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
GABREP78334 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GABREP78334 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.29■□□□□ 0.68
GABREP78334 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.29■□□□□ 0.68
GABREP78334 KRT18P35-201ENST00000510488 1269 ntBASIC19.29■□□□□ 0.68
GABREP78334 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.29■□□□□ 0.68
GABREP78334 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.29■□□□□ 0.68
GABREP78334 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.29■□□□□ 0.68
GABREP78334 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.29■□□□□ 0.68
GABREP78334 AF186192.3-201ENST00000583427 947 ntBASIC19.29■□□□□ 0.68
GABREP78334 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.29■□□□□ 0.68
GABREP78334 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.29■□□□□ 0.68
GABREP78334 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
GABREP78334 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABREP78334 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms