Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.34■□□□□ 0.057e-7■■■■□ 19.8
SUB1P53999 MARS-232ENST00000553162 575 ntTSL 214.89□□□□□ -0.037e-7■■■■□ 19.8
SUB1P53999 MARS-208ENST00000547501 510 ntTSL 214.37□□□□□ -0.117e-7■■■■□ 19.8
SUB1P53999 MARS-217ENST00000549074 532 ntTSL 414.12□□□□□ -0.157e-7■■■■□ 19.8
SUB1P53999 MARS-223ENST00000551431 559 ntTSL 414.12□□□□□ -0.157e-7■■■■□ 19.8
SUB1P53999 MARS-202ENST00000447721 1328 ntTSL 214.07□□□□□ -0.167e-7■■■■□ 19.8
SUB1P53999 MARS-221ENST00000550449 739 ntTSL 313.95□□□□□ -0.187e-7■■■■□ 19.8
SUB1P53999 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.46□□□□□ -0.427e-7■■■■□ 19.8
SUB1P53999 MARS-204ENST00000545888 2979 ntTSL 511.94□□□□□ -0.57e-7■■■■□ 19.8
SUB1P53999 MARS-213ENST00000548674 749 ntTSL 511.36□□□□□ -0.597e-7■■■■□ 19.8
SUB1P53999 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.617e-7■■■■□ 19.8
SUB1P53999 MARS-203ENST00000537638 3592 ntTSL 210.96□□□□□ -0.657e-7■■■■□ 19.8
SUB1P53999 AIFM1-207ENST00000529877 723 ntTSL 312.07□□□□□ -0.482e-7■■■■□ 19.7
SUB1P53999 CHPT1-210ENST00000552351 1524 ntTSL 220.74■□□□□ 0.912e-6■■■■□ 19.7
SUB1P53999 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.852e-6■■■■□ 19.7
SUB1P53999 CHPT1-204ENST00000549128 1552 ntTSL 520.37■□□□□ 0.852e-6■■■■□ 19.7
SUB1P53999 CHPT1-208ENST00000552215 4342 ntTSL 1 (best)6.6□□□□□ -1.352e-6■■■■□ 19.7
SUB1P53999 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.92e-8■■■■□ 19.7
SUB1P53999 SSU72-204ENST00000378726 2238 ntTSL 215.5■□□□□ 0.072e-8■■■■□ 19.7
SUB1P53999 ANAPC11-220ENST00000584197 386 ntTSL 519.54■□□□□ 0.721e-21■■■■□ 19.7
SUB1P53999 ANAPC11-222ENST00000585259 345 ntTSL 511.8□□□□□ -0.521e-21■■■■□ 19.7
SUB1P53999 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.583e-7■■■■□ 19.7
SUB1P53999 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.233e-7■■■■□ 19.7
SUB1P53999 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.343e-8■■■■□ 19.7
SUB1P53999 LSM5-209ENST00000468872 636 ntTSL 23.37□□□□□ -1.872e-7■■■■□ 19.7
SUB1P53999 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.023e-9■■■■□ 19.7
SUB1P53999 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.623e-9■■■■□ 19.7
SUB1P53999 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.663e-9■■■■□ 19.7
SUB1P53999 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.45□□□□□ -1.863e-9■■■■□ 19.7
SUB1P53999 POLD1-212ENST00000600859 3474 ntTSL 211.29□□□□□ -0.61e-6■■■■□ 19.7
SUB1P53999 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.621e-6■■■■□ 19.7
SUB1P53999 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.04□□□□□ -0.641e-6■■■■□ 19.7
SUB1P53999 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.83□□□□□ -0.681e-6■■■■□ 19.7
SUB1P53999 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.71e-6■■■■□ 19.7
SUB1P53999 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.72e-7■■■■□ 19.7
SUB1P53999 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.418e-11■■■■□ 19.7
SUB1P53999 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.228e-11■■■■□ 19.7
SUB1P53999 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.98□□□□□ -1.778e-11■■■■□ 19.7
SUB1P53999 GLS-208ENST00000457316 821 ntTSL 42.89□□□□□ -1.958e-11■■■■□ 19.7
SUB1P53999 GLS-206ENST00000412247 693 ntTSL 32.78□□□□□ -1.968e-11■■■■□ 19.7
SUB1P53999 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC9.68□□□□□ -0.865e-7■■■■□ 19.7
SUB1P53999 MTHFD2-203ENST00000409804 1757 ntTSL 5 BASIC7.15□□□□□ -1.275e-7■■■■□ 19.7
SUB1P53999 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.466e-8■■■■□ 19.6
SUB1P53999 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.025e-7■■■■□ 19.6
SUB1P53999 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC7.27□□□□□ -1.255e-7■■■■□ 19.6
SUB1P53999 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.676e-14■■■■□ 19.6
SUB1P53999 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC9.25□□□□□ -0.936e-14■■■■□ 19.6
SUB1P53999 SNRPD2-207ENST00000588599 805 ntTSL 3 BASIC8.61□□□□□ -1.036e-14■■■■□ 19.6
SUB1P53999 SNRPD2-204ENST00000587367 596 ntTSL 3 BASIC8.36□□□□□ -1.076e-14■■■■□ 19.6
SUB1P53999 SNRPD2-202ENST00000391932 615 ntTSL 2 BASIC7.67□□□□□ -1.186e-14■■■■□ 19.6
SUB1P53999 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.236e-14■■■■□ 19.6
SUB1P53999 SNRPD2-208ENST00000590212 454 ntTSL 3 BASIC6.74□□□□□ -1.336e-14■■■■□ 19.6
SUB1P53999 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.328e-7■■■■□ 19.6
SUB1P53999 FANCI-208ENST00000564920 562 ntTSL 512.91□□□□□ -0.345e-8■■■■□ 19.6
SUB1P53999 FANCI-209ENST00000565255 754 ntTSL 312.89□□□□□ -0.355e-8■■■■□ 19.6
SUB1P53999 FANCI-213ENST00000567891 584 ntTSL 311.78□□□□□ -0.525e-8■■■■□ 19.6
SUB1P53999 FANCI-216ENST00000570110 528 ntTSL 311.78□□□□□ -0.525e-8■■■■□ 19.6
SUB1P53999 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC8.6□□□□□ -1.035e-8■■■■□ 19.6
SUB1P53999 FANCI-215ENST00000568670 285 ntTSL 34.62□□□□□ -1.675e-8■■■■□ 19.6
SUB1P53999 FANCI-203ENST00000447611 3690 ntTSL 22.7□□□□□ -1.985e-8■■■■□ 19.6
SUB1P53999 FANCI-205ENST00000563250 700 ntTSL 52.3□□□□□ -2.045e-8■■■■□ 19.6
SUB1P53999 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.025e-7■■■■□ 19.6
SUB1P53999 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.44□□□□□ -0.425e-7■■■■□ 19.6
SUB1P53999 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.31e-10■■■■□ 19.5
SUB1P53999 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.381e-10■■■■□ 19.5
SUB1P53999 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.47□□□□□ -2.011e-10■■■■□ 19.5
SUB1P53999 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.06□□□□□ -2.081e-10■■■■□ 19.5
SUB1P53999 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.67□□□□□ -2.141e-10■■■■□ 19.5
SUB1P53999 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.185e-7■■■■□ 19.5
SUB1P53999 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.345e-7■■■■□ 19.5
SUB1P53999 CTBP1-215ENST00000514596 648 ntTSL 214.33□□□□□ -0.124e-7■■■■□ 19.5
SUB1P53999 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.031e-6■■■■□ 19.5
SUB1P53999 TRAPPC11-204ENST00000505676 2244 ntTSL 1 (best)14.02□□□□□ -0.161e-6■■■■□ 19.5
SUB1P53999 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.84□□□□□ -0.191e-6■■■■□ 19.5
SUB1P53999 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.581e-6■■■■□ 19.5
SUB1P53999 TRAPPC11-208ENST00000511955 2342 ntTSL 24.12□□□□□ -1.751e-6■■■■□ 19.5
SUB1P53999 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.046e-10■■■■□ 19.5
SUB1P53999 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.136e-10■■■■□ 19.5
SUB1P53999 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.136e-10■■■■□ 19.5
SUB1P53999 CTSB-222ENST00000531551 1855 ntTSL 1 (best)13.81□□□□□ -0.26e-10■■■■□ 19.5
SUB1P53999 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.266e-10■■■■□ 19.5
SUB1P53999 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.286e-10■■■■□ 19.5
SUB1P53999 CTSB-203ENST00000420692 2230 ntTSL 212.94□□□□□ -0.346e-10■■■■□ 19.5
SUB1P53999 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.476e-10■■■■□ 19.5
SUB1P53999 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.536e-10■■■■□ 19.5
SUB1P53999 CTSB-211ENST00000526481 660 ntTSL 511.26□□□□□ -0.616e-10■■■■□ 19.5
SUB1P53999 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.821e-8■■■■□ 19.5
SUB1P53999 BAG6-250ENST00000451898 993 ntTSL 313.91□□□□□ -0.186e-7■■■■□ 19.5
SUB1P53999 BAG6-248ENST00000441054 654 ntTSL 313.52□□□□□ -0.256e-7■■■■□ 19.5
SUB1P53999 BAG6-240ENST00000424480 1056 ntTSL 212.37□□□□□ -0.436e-7■■■■□ 19.5
SUB1P53999 PSMG1-205ENST00000481921 716 ntTSL 22.61□□□□□ -1.991e-8■■■■□ 19.5
SUB1P53999 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.817e-14■■■■□ 19.5
SUB1P53999 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.937e-14■■■■□ 19.5
SUB1P53999 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.352e-9■■■■□ 19.5
SUB1P53999 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.512e-9■■■■□ 19.5
SUB1P53999 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.992e-9■■■■□ 19.5
SUB1P53999 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC7.78□□□□□ -1.162e-9■■■■□ 19.5
SUB1P53999 YWHAZ-222ENST00000523848 664 ntTSL 54.22□□□□□ -1.732e-9■■■■□ 19.5
SUB1P53999 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.882e-9■■■■□ 19.5
SUB1P53999 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.58□□□□□ -22e-9■■■■□ 19.5
Retrieved 100 of 11,644 protein–RNA pairs in 95.6 ms