RNA–Protein interactions for RNA: ENST00000588599.5

SNRPD2-207, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD2, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-207ENST00000588599 NISCHQ9Y2I1 1504 aa28.36■■■□□ 2.13
SNRPD2-207ENST00000588599 ABCC9O60706 1549 aa25.66■■□□□ 1.7
SNRPD2-207ENST00000588599 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
SNRPD2-207ENST00000588599 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
SNRPD2-207ENST00000588599 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
SNRPD2-207ENST00000588599 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
SNRPD2-207ENST00000588599 NACADO15069 1562 aa24.12■■□□□ 1.45
SNRPD2-207ENST00000588599 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
SNRPD2-207ENST00000588599 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
SNRPD2-207ENST00000588599 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
SNRPD2-207ENST00000588599 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
SNRPD2-207ENST00000588599 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
SNRPD2-207ENST00000588599 DCAF1Q9Y4B6 1507 aa23.37■■□□□ 1.33
SNRPD2-207ENST00000588599 SCRIBQ14160 1630 aa23.2■■□□□ 1.3
SNRPD2-207ENST00000588599 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
SNRPD2-207ENST00000588599 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
SNRPD2-207ENST00000588599 CECR2Q9BXF3 1484 aa23.11■■□□□ 1.29
SNRPD2-207ENST00000588599 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
SNRPD2-207ENST00000588599 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
SNRPD2-207ENST00000588599 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
SNRPD2-207ENST00000588599 ATAD2BQ9ULI0 1458 aa22.22■■□□□ 1.15
SNRPD2-207ENST00000588599 ERCC6Q03468 1493 aa22.12■■□□□ 1.13
SNRPD2-207ENST00000588599 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
SNRPD2-207ENST00000588599 CUX2O14529 1486 aa22.1■■□□□ 1.13
SNRPD2-207ENST00000588599 SMARCA2P51531 1590 aa22.09■■□□□ 1.13
SNRPD2-207ENST00000588599 HMGXB3Q12766 1538 aa22.06■■□□□ 1.12
SNRPD2-207ENST00000588599 NESP48681 1621 aa22.02■■□□□ 1.11
SNRPD2-207ENST00000588599 BAZ1AQ9NRL2 1556 aaPredicted RBP21.98■■□□□ 1.11
SNRPD2-207ENST00000588599 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
SNRPD2-207ENST00000588599 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.09
SNRPD2-207ENST00000588599 MROH2BQ7Z745 1585 aa21.87■■□□□ 1.09
SNRPD2-207ENST00000588599 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
SNRPD2-207ENST00000588599 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
SNRPD2-207ENST00000588599 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
SNRPD2-207ENST00000588599 PDS5BQ9NTI5 1447 aa21.68■■□□□ 1.06
SNRPD2-207ENST00000588599 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
SNRPD2-207ENST00000588599 WIZO95785 1651 aa21.6■■□□□ 1.05
SNRPD2-207ENST00000588599 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
SNRPD2-207ENST00000588599 WDR62O43379 1518 aa21.42■■□□□ 1.02
SNRPD2-207ENST00000588599 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
SNRPD2-207ENST00000588599 FANCD2Q9BXW9 1451 aa21.36■■□□□ 1.01
SNRPD2-207ENST00000588599 CEP164Q9UPV0 1460 aa21.36■■□□□ 1.01
SNRPD2-207ENST00000588599 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
SNRPD2-207ENST00000588599 CFTRP13569 1480 aa21.33■■□□□ 1.01
SNRPD2-207ENST00000588599 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
SNRPD2-207ENST00000588599 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
SNRPD2-207ENST00000588599 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
SNRPD2-207ENST00000588599 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
SNRPD2-207ENST00000588599 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
SNRPD2-207ENST00000588599 ZNF608Q9ULD9 1512 aaPredicted RBP20.98■□□□□ 0.95
SNRPD2-207ENST00000588599 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
SNRPD2-207ENST00000588599 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
SNRPD2-207ENST00000588599 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
SNRPD2-207ENST00000588599 RIMBP3CA6NJZ7 1639 aa20.85■□□□□ 0.93
SNRPD2-207ENST00000588599 RIMBP3BA6NNM3 1639 aa20.85■□□□□ 0.93
SNRPD2-207ENST00000588599 RIMBP3Q9UFD9 1639 aa20.85■□□□□ 0.93
SNRPD2-207ENST00000588599 DNMBPQ6XZF7 1577 aa20.81■□□□□ 0.92
SNRPD2-207ENST00000588599 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
SNRPD2-207ENST00000588599 EIF4G3O43432 1585 aaKnown RBP20.78■□□□□ 0.92
SNRPD2-207ENST00000588599 ARHGEF11O15085 1522 aa20.77■□□□□ 0.92
SNRPD2-207ENST00000588599 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
SNRPD2-207ENST00000588599 CYB5RLQ6IPT4 315 aa20.73■□□□□ 0.91
SNRPD2-207ENST00000588599 FBLN2P98095 1184 aa20.72■□□□□ 0.91
SNRPD2-207ENST00000588599 POLA1P09884 1462 aaPredicted RBP20.71■□□□□ 0.91
SNRPD2-207ENST00000588599 CHD1O14646 1710 aa20.7■□□□□ 0.9
SNRPD2-207ENST00000588599 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
SNRPD2-207ENST00000588599 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
SNRPD2-207ENST00000588599 SOGA1O94964 1423 aa20.66■□□□□ 0.9
SNRPD2-207ENST00000588599 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
SNRPD2-207ENST00000588599 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
SNRPD2-207ENST00000588599 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
SNRPD2-207ENST00000588599 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
SNRPD2-207ENST00000588599 CUX1P39880 1505 aa20.53■□□□□ 0.88
SNRPD2-207ENST00000588599 SNAPC4Q5SXM2 1469 aa20.51■□□□□ 0.87
SNRPD2-207ENST00000588599 WDR97A6NE52 1622 aa20.46■□□□□ 0.87
SNRPD2-207ENST00000588599 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
SNRPD2-207ENST00000588599 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
SNRPD2-207ENST00000588599 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
SNRPD2-207ENST00000588599 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
SNRPD2-207ENST00000588599 SYNJ1O43426 1573 aa20.39■□□□□ 0.85
SNRPD2-207ENST00000588599 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
SNRPD2-207ENST00000588599 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
SNRPD2-207ENST00000588599 PBRM1Q86U86 1689 aa20.33■□□□□ 0.85
SNRPD2-207ENST00000588599 ABCA10Q8WWZ4 1543 aa20.32■□□□□ 0.84
SNRPD2-207ENST00000588599 ABCA5Q8WWZ7 1642 aa20.27■□□□□ 0.83
SNRPD2-207ENST00000588599 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
SNRPD2-207ENST00000588599 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
SNRPD2-207ENST00000588599 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
SNRPD2-207ENST00000588599 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
SNRPD2-207ENST00000588599 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
SNRPD2-207ENST00000588599 NUP160Q12769 1436 aa20.12■□□□□ 0.81
SNRPD2-207ENST00000588599 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
SNRPD2-207ENST00000588599 CEP170Q5SW79 1584 aa20.12■□□□□ 0.81
SNRPD2-207ENST00000588599 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
SNRPD2-207ENST00000588599 ERICH3Q5RHP9 1530 aa20.04■□□□□ 0.8
SNRPD2-207ENST00000588599 SHROOM2Q13796 1616 aa20.03■□□□□ 0.8
SNRPD2-207ENST00000588599 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
SNRPD2-207ENST00000588599 AEBP2Q6ZN18 517 aaPredicted RBP20■□□□□ 0.79
SNRPD2-207ENST00000588599 PRG4Q92954 1404 aaPredicted RBP19.97■□□□□ 0.79
SNRPD2-207ENST00000588599 KIF13AQ9H1H9 1805 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms