Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.09□□□□□ -0.15
PCP4P48539 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.09□□□□□ -0.15
PCP4P48539 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.09□□□□□ -0.15
PCP4P48539 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.09□□□□□ -0.15
PCP4P48539 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PCP4P48539 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCP4P48539 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PCP4P48539 ANOS2P-203ENST00000472227 1816 ntBASIC14.08□□□□□ -0.15
PCP4P48539 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PCP4P48539 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PCP4P48539 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PCP4P48539 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PCP4P48539 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCP4P48539 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCP4P48539 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
PCP4P48539 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
PCP4P48539 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCP4P48539 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
PCP4P48539 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.07□□□□□ -0.16
PCP4P48539 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCP4P48539 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.07□□□□□ -0.16
PCP4P48539 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.07□□□□□ -0.16
PCP4P48539 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCP4P48539 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCP4P48539 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.06□□□□□ -0.16
PCP4P48539 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.06□□□□□ -0.16
PCP4P48539 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.06□□□□□ -0.16
PCP4P48539 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.06□□□□□ -0.16
PCP4P48539 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCP4P48539 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCP4P48539 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms