Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ACSL4-209ENST00000505075 390 ntTSL 33.44□□□□□ -1.868e-15■■□□□ 13.3
PRPF8Q6P2Q9 FASTKD3-208ENST00000513658 819 ntTSL 53.39□□□□□ -1.874e-6■■□□□ 13.3
PRPF8Q6P2Q9 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.882e-6■■□□□ 13.3
PRPF8Q6P2Q9 RNPEP-205ENST00000464707 450 ntTSL 23.19□□□□□ -1.94e-6■■□□□ 13.3
PRPF8Q6P2Q9 CUL3-212ENST00000497715 2400 ntTSL 23.16□□□□□ -1.94e-6■■□□□ 13.3
PRPF8Q6P2Q9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.13□□□□□ -1.914e-6■■□□□ 13.3
PRPF8Q6P2Q9 NUP93-207ENST00000563486 635 ntTSL 23.04□□□□□ -1.924e-6■■□□□ 13.3
PRPF8Q6P2Q9 ABHD2-203ENST00000562254 787 ntTSL 52.68□□□□□ -1.984e-6■■□□□ 13.3
PRPF8Q6P2Q9 CNOT2-216ENST00000548939 552 ntTSL 22.64□□□□□ -1.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 DCBLD2-208ENST00000486004 582 ntTSL 32.62□□□□□ -1.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 KMT2A-207ENST00000528278 1799 ntTSL 22.6□□□□□ -1.994e-6■■□□□ 13.3
PRPF8Q6P2Q9 NUP93-204ENST00000563405 477 ntTSL 22.58□□□□□ -24e-6■■□□□ 13.3
PRPF8Q6P2Q9 CNOT2-203ENST00000546673 726 ntTSL 32.53□□□□□ -24e-6■■□□□ 13.3
PRPF8Q6P2Q9 CALD1-214ENST00000466704 903 ntTSL 32.35□□□□□ -2.034e-6■■□□□ 13.3
PRPF8Q6P2Q9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.044e-6■■□□□ 13.3
PRPF8Q6P2Q9 CALD1-216ENST00000473714 230 ntTSL 22.28□□□□□ -2.054e-6■■□□□ 13.3
PRPF8Q6P2Q9 CPD-205ENST00000581826 579 ntTSL 21.96□□□□□ -2.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 MINDY3-203ENST00000418767 967 ntTSL 31.96□□□□□ -2.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 RIOK1-205ENST00000493691 310 ntTSL 31.95□□□□□ -2.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPGS2-212ENST00000590500 488 ntTSL 31.95□□□□□ -2.14e-6■■□□□ 13.3
PRPF8Q6P2Q9 GSTA4-206ENST00000486559 1698 ntTSL 21.9□□□□□ -2.114e-6■■□□□ 13.3
PRPF8Q6P2Q9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.8□□□□□ -2.125e-7■■□□□ 13.3
PRPF8Q6P2Q9 SLC4A7-216ENST00000465487 735 ntTSL 30.94□□□□□ -2.264e-6■■□□□ 13.3
PRPF8Q6P2Q9 SEPT7P2-204ENST00000413875 799 ntTSL 30.87□□□□□ -2.274e-6■■□□□ 13.3
PRPF8Q6P2Q9 ST3GAL6-215ENST00000485145 700 ntTSL 50.86□□□□□ -2.274e-6■■□□□ 13.3
PRPF8Q6P2Q9 SEC31A-235ENST00000512732 551 ntTSL 40.83□□□□□ -2.284e-6■■□□□ 13.3
PRPF8Q6P2Q9 FAM192A-221ENST00000570184 593 ntTSL 30.71□□□□□ -2.34e-6■■□□□ 13.3
PRPF8Q6P2Q9 ST3GAL6-209ENST00000474595 525 ntTSL 30.42□□□□□ -2.344e-6■■□□□ 13.3
PRPF8Q6P2Q9 RNF13-206ENST00000466795 586 ntTSL 40.38□□□□□ -2.354e-6■■□□□ 13.3
PRPF8Q6P2Q9 CAB39-204ENST00000478152 654 ntTSL 2-0.65□□□□□ -2.514e-6■■□□□ 13.3
PRPF8Q6P2Q9 SNX6-204ENST00000555541 339 ntTSL 5-1.44□□□□□ -2.642e-11■■□□□ 13.3
PRPF8Q6P2Q9 PCNX3-204ENST00000531045 266 ntTSL 314.24□□□□□ -0.132e-8■■□□□ 13.3
PRPF8Q6P2Q9 VGLL4-206ENST00000418000 792 ntTSL 322.03■■□□□ 1.122e-6■■□□□ 13.3
PRPF8Q6P2Q9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.91□□□□□ -0.022e-6■■□□□ 13.3
PRPF8Q6P2Q9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.162e-6■■□□□ 13.3
PRPF8Q6P2Q9 VGLL4-201ENST00000273038 3725 ntTSL 1 (best) BASIC10.51□□□□□ -0.732e-6■■□□□ 13.3
PRPF8Q6P2Q9 VGLL4-213ENST00000445411 726 ntTSL 58.12□□□□□ -1.112e-6■■□□□ 13.3
PRPF8Q6P2Q9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.96e-16■■□□□ 13.3
PRPF8Q6P2Q9 ARFGAP1-213ENST00000520022 558 ntTSL 415.01□□□□□ -0.012e-12■■□□□ 13.3
PRPF8Q6P2Q9 GSDMD-205ENST00000526051 700 ntTSL 313.74□□□□□ -0.215e-9■■□□□ 13.3
PRPF8Q6P2Q9 KATNB1-202ENST00000562542 512 ntTSL 216.51■□□□□ 0.233e-6■■□□□ 13.3
PRPF8Q6P2Q9 KATNB1-209ENST00000569018 668 ntTSL 215.86■□□□□ 0.133e-6■■□□□ 13.3
PRPF8Q6P2Q9 NPAS2-207ENST00000471974 513 ntTSL 36.93□□□□□ -1.32e-11■■□□□ 13.3
PRPF8Q6P2Q9 SMG9-203ENST00000595700 1401 ntTSL 212.58□□□□□ -0.41e-6■■□□□ 13.3
PRPF8Q6P2Q9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.79□□□□□ -0.681e-6■■□□□ 13.3
PRPF8Q6P2Q9 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.781e-6■■□□□ 13.3
PRPF8Q6P2Q9 SMG9-206ENST00000597598 1077 ntTSL 59.81□□□□□ -0.841e-6■■□□□ 13.3
PRPF8Q6P2Q9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.683e-9■■□□□ 13.3
PRPF8Q6P2Q9 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.46■□□□□ 0.393e-9■■□□□ 13.3
PRPF8Q6P2Q9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.363e-9■■□□□ 13.3
PRPF8Q6P2Q9 GGNBP2-214ENST00000616019 695 ntTSL 215.33■□□□□ 0.043e-9■■□□□ 13.3
PRPF8Q6P2Q9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.17□□□□□ -0.143e-9■■□□□ 13.3
PRPF8Q6P2Q9 RAB11FIP4-210ENST00000585058 5824 ntTSL 210.32□□□□□ -0.761e-6■■□□□ 13.3
PRPF8Q6P2Q9 UBE2J2-216ENST00000488418 750 ntTSL 215.97■□□□□ 0.158e-12■■□□□ 13.3
PRPF8Q6P2Q9 SYNJ2-202ENST00000367112 5091 ntTSL 27.38□□□□□ -1.232e-9■■□□□ 13.3
PRPF8Q6P2Q9 MCF2L-205ENST00000397017 3903 ntTSL 513.22□□□□□ -0.299e-7■■□□□ 13.3
PRPF8Q6P2Q9 IGDCC3-204ENST00000559231 748 ntTSL 312.17□□□□□ -0.467e-9■■□□□ 13.3
PRPF8Q6P2Q9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.433e-7■■□□□ 13.3
PRPF8Q6P2Q9 SLC38A5-209ENST00000497336 493 ntTSL 512.01□□□□□ -0.493e-7■■□□□ 13.3
PRPF8Q6P2Q9 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.623e-7■■□□□ 13.3
PRPF8Q6P2Q9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.01□□□□□ -0.653e-7■■□□□ 13.3
PRPF8Q6P2Q9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.01□□□□□ -0.653e-7■■□□□ 13.3
PRPF8Q6P2Q9 FBXO31-208ENST00000636077 660 ntTSL 518.62■□□□□ 0.575e-14■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.09□□□□□ -0.153e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-208ENST00000585320 503 ntTSL 313.41□□□□□ -0.263e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.25□□□□□ -0.293e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-216ENST00000641856 2619 nt13.24□□□□□ -0.293e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-212ENST00000641427 1411 nt11.34□□□□□ -0.593e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-215ENST00000641709 3232 nt11.16□□□□□ -0.623e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-203ENST00000582171 1372 ntTSL 210.29□□□□□ -0.763e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-214ENST00000641703 1131 nt10.22□□□□□ -0.773e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC10.2□□□□□ -0.783e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-210ENST00000641305 3315 nt10.04□□□□□ -0.83e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-206ENST00000584061 723 ntTSL 49.16□□□□□ -0.943e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-211ENST00000641323 3657 nt9.1□□□□□ -0.953e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-205ENST00000583599 696 ntTSL 48.55□□□□□ -1.043e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-209ENST00000641285 488 nt7.92□□□□□ -1.143e-6■■□□□ 13.3
PRPF8Q6P2Q9 PNPO-213ENST00000641511 453 nt7.72□□□□□ -1.173e-6■■□□□ 13.3
PRPF8Q6P2Q9 BCL2L1-206ENST00000434194 381 ntTSL 36.48□□□□□ -1.374e-8■■□□□ 13.3
PRPF8Q6P2Q9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.96■□□□□ 0.151e-7■■□□□ 13.3
PRPF8Q6P2Q9 ESYT1-203ENST00000547667 594 ntTSL 211.3□□□□□ -0.64e-11■■□□□ 13.3
PRPF8Q6P2Q9 ARFGAP2-222ENST00000530596 534 ntTSL 312.52□□□□□ -0.412e-14■■□□□ 13.3
PRPF8Q6P2Q9 TM9SF4-207ENST00000495749 3023 ntTSL 27.38□□□□□ -1.234e-8■■□□□ 13.3
PRPF8Q6P2Q9 NOP14-205ENST00000507120 703 ntTSL 313.09□□□□□ -0.318e-8■■□□□ 13.2
PRPF8Q6P2Q9 USF2-215ENST00000602164 582 ntTSL 322.64■■□□□ 1.228e-24■■□□□ 13.2
PRPF8Q6P2Q9 USF2-210ENST00000598058 510 ntTSL 216.91■□□□□ 0.38e-24■■□□□ 13.2
PRPF8Q6P2Q9 HOMER3-210ENST00000599097 770 ntTSL 315.15■□□□□ 0.026e-10■■□□□ 13.2
PRPF8Q6P2Q9 HOMER3-212ENST00000600077 675 ntTSL 312.54□□□□□ -0.46e-10■■□□□ 13.2
PRPF8Q6P2Q9 HOMER3-211ENST00000599808 555 ntTSL 211.09□□□□□ -0.636e-10■■□□□ 13.2
PRPF8Q6P2Q9 RALY-209ENST00000489384 227 ntTSL 35.45□□□□□ -1.542e-18■■□□□ 13.2
PRPF8Q6P2Q9 FASN-205ENST00000584610 857 ntTSL 216.1■□□□□ 0.174e-24■■□□□ 13.2
PRPF8Q6P2Q9 AC008763.2-202ENST00000599243 570 ntAPPRIS ALT2 TSL 416.57■□□□□ 0.242e-7■■□□□ 13.2
PRPF8Q6P2Q9 COPG1-204ENST00000509208 472 ntTSL 28.85□□□□□ -0.991e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.46■□□□□ 0.071e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.04□□□□□ -0.481e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.78□□□□□ -0.521e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.67□□□□□ -0.541e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.55□□□□□ -0.561e-6■■□□□ 13.2
PRPF8Q6P2Q9 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.851e-6■■□□□ 13.2
PRPF8Q6P2Q9 ACLY-205ENST00000588547 471 ntTSL 38.58□□□□□ -1.041e-6■■□□□ 13.2
Retrieved 100 of 73,762 protein–RNA pairs in 1101.1 ms