RNA–Protein interactions for RNA: ENST00000569018.5

KATNB1-209, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-209ENST00000569018 NISCHQ9Y2I1 1504 aa45.86■■■■■ 4.93
KATNB1-209ENST00000569018 CCDC180Q9P1Z9 1646 aa40.87■■■■■ 4.13
KATNB1-209ENST00000569018 ABCC9O60706 1549 aa40.04■■■■■ 4
KATNB1-209ENST00000569018 RB1CC1Q8TDY2 1594 aa38.53■■■■□ 3.76
KATNB1-209ENST00000569018 NACADO15069 1562 aa38.46■■■■□ 3.75
KATNB1-209ENST00000569018 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
KATNB1-209ENST00000569018 MYO15BQ96JP2 1530 aa38.23■■■■□ 3.71
KATNB1-209ENST00000569018 ZCCHC6Q5VYS8 1495 aaKnown RBP38.18■■■■□ 3.7
KATNB1-209ENST00000569018 DCAF1Q9Y4B6 1507 aa38■■■■□ 3.67
KATNB1-209ENST00000569018 UNC13AQ9UPW8 1703 aa37.58■■■■□ 3.61
KATNB1-209ENST00000569018 PABPN1Q86U42 306 aaKnown RBP eCLIP37.36■■■■□ 3.57
KATNB1-209ENST00000569018 BICRAQ9NZM4 1560 aa37.34■■■■□ 3.57
KATNB1-209ENST00000569018 SCRIBQ14160 1630 aa37.19■■■■□ 3.54
KATNB1-209ENST00000569018 SHROOM4Q9ULL8 1493 aa37.04■■■■□ 3.52
KATNB1-209ENST00000569018 DNAJC5BQ9UF47 199 aa36.87■■■■□ 3.49
KATNB1-209ENST00000569018 EIF4G1Q04637 1599 aaKnown RBP36.36■■■■□ 3.41
KATNB1-209ENST00000569018 CC2D2AQ9P2K1 1620 aa36.24■■■■□ 3.39
KATNB1-209ENST00000569018 CECR2Q9BXF3 1484 aa36.03■■■■□ 3.36
KATNB1-209ENST00000569018 SMARCA4P51532 1647 aa35.61■■■■□ 3.29
KATNB1-209ENST00000569018 BAZ1AQ9NRL2 1556 aaPredicted RBP35.57■■■■□ 3.28
KATNB1-209ENST00000569018 NCAPD3P42695 1498 aa35.49■■■■□ 3.27
KATNB1-209ENST00000569018 ATAD2BQ9ULI0 1458 aa35.47■■■■□ 3.27
KATNB1-209ENST00000569018 SMARCA2P51531 1590 aa35.43■■■■□ 3.26
KATNB1-209ENST00000569018 MROH2BQ7Z745 1585 aa35.31■■■■□ 3.24
KATNB1-209ENST00000569018 PEG3Q9GZU2 1588 aa35.31■■■■□ 3.24
KATNB1-209ENST00000569018 HMGXB3Q12766 1538 aa35.31■■■■□ 3.24
KATNB1-209ENST00000569018 BAZ1BQ9UIG0 1483 aaKnown RBP35.15■■■■□ 3.22
KATNB1-209ENST00000569018 WIZO95785 1651 aa34.89■■■■□ 3.18
KATNB1-209ENST00000569018 RSF1Q96T23 1441 aaPredicted RBP34.87■■■■□ 3.17
KATNB1-209ENST00000569018 NESP48681 1621 aa34.6■■■■□ 3.13
KATNB1-209ENST00000569018 TOP2AP11388 1531 aaKnown RBP34.58■■■■□ 3.13
KATNB1-209ENST00000569018 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.12
KATNB1-209ENST00000569018 ERCC6Q03468 1493 aa34.54■■■■□ 3.12
KATNB1-209ENST00000569018 CADPSQ9ULU8 1353 aa34.43■■■■□ 3.1
KATNB1-209ENST00000569018 PDS5BQ9NTI5 1447 aa34.34■■■■□ 3.09
KATNB1-209ENST00000569018 CUX2O14529 1486 aa34.29■■■■□ 3.08
KATNB1-209ENST00000569018 CFTRP13569 1480 aa34.2■■■■□ 3.07
KATNB1-209ENST00000569018 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
KATNB1-209ENST00000569018 THOC2Q8NI27 1593 aaKnown RBP34.16■■■■□ 3.06
KATNB1-209ENST00000569018 CCDC88BA6NC98 1476 aa34.14■■■■□ 3.06
KATNB1-209ENST00000569018 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.04
KATNB1-209ENST00000569018 CEP164Q9UPV0 1460 aa34■■■■□ 3.03
KATNB1-209ENST00000569018 MRC2Q9UBG0 1479 aa33.98■■■■□ 3.03
KATNB1-209ENST00000569018 PRDM2Q13029 1718 aa33.91■■■■□ 3.02
KATNB1-209ENST00000569018 WDR62O43379 1518 aa33.89■■■■□ 3.02
KATNB1-209ENST00000569018 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
KATNB1-209ENST00000569018 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
KATNB1-209ENST00000569018 ABCC8Q09428 1581 aa33.5■■■□□ 2.95
KATNB1-209ENST00000569018 TOPBP1Q92547 1522 aa33.46■■■□□ 2.95
KATNB1-209ENST00000569018 DNMBPQ6XZF7 1577 aa33.42■■■□□ 2.94
KATNB1-209ENST00000569018 DNAJC5Q9H3Z4 198 aa33.38■■■□□ 2.93
KATNB1-209ENST00000569018 IFT140Q96RY7 1462 aa33.31■■■□□ 2.92
KATNB1-209ENST00000569018 POLA1P09884 1462 aaPredicted RBP33.17■■■□□ 2.9
KATNB1-209ENST00000569018 CUX1P39880 1505 aa33.14■■■□□ 2.9
KATNB1-209ENST00000569018 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
KATNB1-209ENST00000569018 TARBP1Q13395 1621 aaKnown RBP33.11■■■□□ 2.89
KATNB1-209ENST00000569018 FGD5Q6ZNL6 1462 aa33.05■■■□□ 2.88
KATNB1-209ENST00000569018 SOGA1O94964 1423 aa33.02■■■□□ 2.88
KATNB1-209ENST00000569018 EIF4G3O43432 1585 aaKnown RBP33■■■□□ 2.87
KATNB1-209ENST00000569018 RAD54L2Q9Y4B4 1467 aa32.99■■■□□ 2.87
KATNB1-209ENST00000569018 AQRO60306 1485 aaKnown RBP eCLIP32.91■■■□□ 2.863e-6■■□□□ 13.8
KATNB1-209ENST00000569018 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
KATNB1-209ENST00000569018 WRNQ14191 1432 aaPredicted RBP eCLIP32.88■■■□□ 2.85
KATNB1-209ENST00000569018 TOP2BQ02880 1626 aa32.84■■■□□ 2.85
KATNB1-209ENST00000569018 BIVM-ERCC5R4GMW8 1640 aa32.84■■■□□ 2.85
KATNB1-209ENST00000569018 TDRD9Q8NDG6 1382 aaKnown RBP32.83■■■□□ 2.85
KATNB1-209ENST00000569018 OSCARQ8IYS5 282 aa32.8■■■□□ 2.84
KATNB1-209ENST00000569018 SYNJ1O43426 1573 aa32.79■■■□□ 2.84
KATNB1-209ENST00000569018 ABCA10Q8WWZ4 1543 aa32.76■■■□□ 2.83
KATNB1-209ENST00000569018 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
KATNB1-209ENST00000569018 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
KATNB1-209ENST00000569018 ABCA5Q8WWZ7 1642 aa32.63■■■□□ 2.81
KATNB1-209ENST00000569018 SNAPC4Q5SXM2 1469 aa32.62■■■□□ 2.81
KATNB1-209ENST00000569018 MAGI1Q96QZ7 1491 aaPredicted RBP32.62■■■□□ 2.81
KATNB1-209ENST00000569018 CHD1O14646 1710 aa32.59■■■□□ 2.81
KATNB1-209ENST00000569018 PBRM1Q86U86 1689 aa32.56■■■□□ 2.8
KATNB1-209ENST00000569018 FBLN2P98095 1184 aa32.5■■■□□ 2.79
KATNB1-209ENST00000569018 SYNJ2O15056 1496 aa32.48■■■□□ 2.79
KATNB1-209ENST00000569018 CHMP7Q8WUX9 453 aaPredicted RBP32.44■■■□□ 2.78
KATNB1-209ENST00000569018 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
KATNB1-209ENST00000569018 ADAMTS12P58397 1594 aa32.32■■■□□ 2.77
KATNB1-209ENST00000569018 FHAD1B1AJZ9 1412 aa32.28■■■□□ 2.76
KATNB1-209ENST00000569018 CLASP1Q7Z460 1538 aa32.28■■■□□ 2.76
KATNB1-209ENST00000569018 RIMBP3CA6NJZ7 1639 aa32.28■■■□□ 2.76
KATNB1-209ENST00000569018 RIMBP3BA6NNM3 1639 aa32.28■■■□□ 2.76
KATNB1-209ENST00000569018 RIMBP3Q9UFD9 1639 aa32.28■■■□□ 2.76
KATNB1-209ENST00000569018 ARHGEF11O15085 1522 aa32.27■■■□□ 2.76
KATNB1-209ENST00000569018 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
KATNB1-209ENST00000569018 KIF27Q86VH2 1401 aa32.22■■■□□ 2.75
KATNB1-209ENST00000569018 TRIM41Q8WV44 630 aa32.14■■■□□ 2.74
KATNB1-209ENST00000569018 NUP160Q12769 1436 aa32.13■■■□□ 2.73
KATNB1-209ENST00000569018 IGF1RP08069 1367 aa32.09■■■□□ 2.73
KATNB1-209ENST00000569018 CEP170Q5SW79 1584 aa32.07■■■□□ 2.72
KATNB1-209ENST00000569018 CUL7Q14999 1698 aa32.04■■■□□ 2.72
KATNB1-209ENST00000569018 ARAP1Q96P48 1450 aa32■■■□□ 2.71
KATNB1-209ENST00000569018 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
KATNB1-209ENST00000569018 CARMIL1Q5VZK9 1371 aa31.9■■■□□ 2.7
KATNB1-209ENST00000569018 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
KATNB1-209ENST00000569018 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
KATNB1-209ENST00000569018 KIAA0586Q9BVV6 1533 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms