RNA–Protein interactions for RNA: ENST00000378036.5

MINDY3-202, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 2 BASIC

Gene MINDY3, Length 2,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-202ENST00000378036 AEBP2Q6ZN18 517 aaPredicted RBP11.21□□□□□ -0.61
MINDY3-202ENST00000378036 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
MINDY3-202ENST00000378036 SENP3Q9H4L4 574 aaPredicted RBP9.63□□□□□ -0.87
MINDY3-202ENST00000378036 PHF23Q9BUL5 403 aaPredicted RBP9.46□□□□□ -0.89
MINDY3-202ENST00000378036 POTEDQ86YR6 584 aa9.1□□□□□ -0.95
MINDY3-202ENST00000378036 FOXD1Q16676 465 aa9.03□□□□□ -0.96
MINDY3-202ENST00000378036 MSH5O43196 834 aa8.59□□□□□ -1.03
MINDY3-202ENST00000378036 PIAS4Q8N2W9 510 aaPredicted RBP8.36□□□□□ -1.07
MINDY3-202ENST00000378036 PPP6R1Q9UPN7 881 aa8.14□□□□□ -1.11
MINDY3-202ENST00000378036 ADRA2BP18089 450 aa8.1□□□□□ -1.11
MINDY3-202ENST00000378036 PLPPR3Q6T4P5 718 aa8.01□□□□□ -1.13
MINDY3-202ENST00000378036 CACNB1Q02641 598 aaPredicted RBP7.66□□□□□ -1.18
MINDY3-202ENST00000378036 MAPK8IP2Q13387 824 aaPredicted RBP7.57□□□□□ -1.2
MINDY3-202ENST00000378036 DMRT2Q9Y5R5 561 aa7.56□□□□□ -1.2
MINDY3-202ENST00000378036 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
MINDY3-202ENST00000378036 DCAF8L1A6NGE4 600 aa7.34□□□□□ -1.23
MINDY3-202ENST00000378036 RNF39Q9H2S5 420 aa7.3□□□□□ -1.24
MINDY3-202ENST00000378036 C1QBPQ07021 282 aaKnown RBP7.17□□□□□ -1.26
MINDY3-202ENST00000378036 HOXD11P31277 338 aaPredicted RBP7.11□□□□□ -1.27
MINDY3-202ENST00000378036 POTEHQ6S545 545 aa7.06□□□□□ -1.28
MINDY3-202ENST00000378036 PPP4R3CPQ6ZMV5 832 aa6.97□□□□□ -1.29
MINDY3-202ENST00000378036 RNF216Q9NWF9 866 aaPredicted RBP6.95□□□□□ -1.3
MINDY3-202ENST00000378036 CNKSR2Q8WXI2 1034 aa6.92□□□□□ -1.3
MINDY3-202ENST00000378036 DNAJC5BQ9UF47 199 aa6.91□□□□□ -1.3
MINDY3-202ENST00000378036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.82□□□□□ -1.32
MINDY3-202ENST00000378036 DSG3P32926 999 aa6.7□□□□□ -1.34
MINDY3-202ENST00000378036 CAPN15O75808 1086 aa6.68□□□□□ -1.34
MINDY3-202ENST00000378036 SPINK5Q9NQ38 1064 aaPredicted RBP6.66□□□□□ -1.34
MINDY3-202ENST00000378036 KCNA4P22459 653 aa6.65□□□□□ -1.34
MINDY3-202ENST00000378036 U3KPZ7 1027 aaPredicted RBP6.61□□□□□ -1.35
MINDY3-202ENST00000378036 NCBP3Q53F19 620 aaKnown RBP6.57□□□□□ -1.36
MINDY3-202ENST00000378036 ABCB7O75027 752 aa6.49□□□□□ -1.37
MINDY3-202ENST00000378036 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
MINDY3-202ENST00000378036 TRHP20396 242 aaPredicted RBP6.48□□□□□ -1.37
MINDY3-202ENST00000378036 CHRDL2Q6WN34 429 aa6.44□□□□□ -1.38
MINDY3-202ENST00000378036 EHMT2Q96KQ7 1210 aa6.42□□□□□ -1.38
MINDY3-202ENST00000378036 SP7Q8TDD2 431 aaPredicted RBP6.41□□□□□ -1.38
MINDY3-202ENST00000378036 ZNF219Q9P2Y4 722 aaPredicted RBP6.41□□□□□ -1.38
MINDY3-202ENST00000378036 RBM42Q9BTD8 480 aaKnown RBP6.4□□□□□ -1.38
MINDY3-202ENST00000378036 APLP2Q06481 763 aa6.36□□□□□ -1.39
MINDY3-202ENST00000378036 SLC4A1APQ9BWU0 796 aaKnown RBP6.33□□□□□ -1.4
MINDY3-202ENST00000378036 SLC4A2P04920 1241 aa6.3□□□□□ -1.4
MINDY3-202ENST00000378036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.27□□□□□ -1.4
MINDY3-202ENST00000378036 HNRNPUL2Q1KMD3 747 aaKnown RBP6.27□□□□□ -1.4
MINDY3-202ENST00000378036 CSRNP3Q8WYN3 585 aa6.25□□□□□ -1.41
MINDY3-202ENST00000378036 ZBTB22O15209 634 aa6.24□□□□□ -1.41
MINDY3-202ENST00000378036 HAX1O00165 279 aa6.23□□□□□ -1.41
MINDY3-202ENST00000378036 SAMD1Q6SPF0 538 aaPredicted RBP6.22□□□□□ -1.41
MINDY3-202ENST00000378036 POLA2Q14181 598 aa6.2□□□□□ -1.42
MINDY3-202ENST00000378036 PIP4P2Q8N4L2 257 aa6.19□□□□□ -1.42
MINDY3-202ENST00000378036 AKT1S1Q96B36 256 aa6.17□□□□□ -1.42
MINDY3-202ENST00000378036 REM2Q8IYK8 340 aaPredicted RBP6.12□□□□□ -1.43
MINDY3-202ENST00000378036 EVX2Q03828 476 aa6.1□□□□□ -1.43
MINDY3-202ENST00000378036 FXR2P51116 673 aaKnown RBP eCLIP6.07□□□□□ -1.44
MINDY3-202ENST00000378036 PITPNM1O00562 1244 aa6.06□□□□□ -1.44
MINDY3-202ENST00000378036 PLSCR2Q9NRY7 297 aa6.03□□□□□ -1.44
MINDY3-202ENST00000378036 LHX8Q68G74 356 aa6.02□□□□□ -1.45
MINDY3-202ENST00000378036 OSCARQ8IYS5 282 aa6.02□□□□□ -1.45
MINDY3-202ENST00000378036 FOXD4L1Q9NU39 408 aa6.01□□□□□ -1.45
MINDY3-202ENST00000378036 ZBTB12Q9Y330 459 aaPredicted RBP6□□□□□ -1.45
MINDY3-202ENST00000378036 MYCNP04198 464 aaPredicted RBP6□□□□□ -1.45
MINDY3-202ENST00000378036 ATF5Q9Y2D1 282 aaPredicted RBP5.94□□□□□ -1.46
MINDY3-202ENST00000378036 GABBR2O75899 941 aa5.93□□□□□ -1.46
MINDY3-202ENST00000378036 PRKAR2AP13861 404 aaKnown RBP5.91□□□□□ -1.46
MINDY3-202ENST00000378036 C19orf67A6NJJ6 358 aa5.89□□□□□ -1.47
MINDY3-202ENST00000378036 CLEC11AQ9Y240 323 aa5.86□□□□□ -1.47
MINDY3-202ENST00000378036 SPDYE1Q8NFV5 336 aaPredicted RBP5.8□□□□□ -1.48
MINDY3-202ENST00000378036 SPDYE2BA6NHP3 402 aa5.8□□□□□ -1.48
MINDY3-202ENST00000378036 POTEIP0CG38 1075 aa5.8□□□□□ -1.48
MINDY3-202ENST00000378036 SPDYE6P0CI01 402 aa5.8□□□□□ -1.48
MINDY3-202ENST00000378036 SPDYE2Q495Y8 402 aa5.8□□□□□ -1.48
MINDY3-202ENST00000378036 ATXN8OSP0DMR3 200 aa5.77□□□□□ -1.48
MINDY3-202ENST00000378036 CHADLQ6NUI6 762 aa5.77□□□□□ -1.48
MINDY3-202ENST00000378036 DCBLD2Q96PD2 775 aa5.71□□□□□ -1.5
MINDY3-202ENST00000378036 POTEMA6NI47 508 aa5.7□□□□□ -1.5
MINDY3-202ENST00000378036 CD44P16070 742 aaKnown RBP5.7□□□□□ -1.5
MINDY3-202ENST00000378036 FBLN2P98095 1184 aa5.7□□□□□ -1.5
MINDY3-202ENST00000378036 ZNF692Q9BU19 519 aaPredicted RBP5.69□□□□□ -1.5
MINDY3-202ENST00000378036 PRR29P0C7W0 189 aa5.68□□□□□ -1.5
MINDY3-202ENST00000378036 POTEGQ6S5H5 508 aa5.67□□□□□ -1.5
MINDY3-202ENST00000378036 OTUD5Q96G74 571 aa5.66□□□□□ -1.5
MINDY3-202ENST00000378036 SSUH2Q9Y2M2 353 aa5.66□□□□□ -1.5
MINDY3-202ENST00000378036 CLCN6P51797 869 aa5.65□□□□□ -1.5
MINDY3-202ENST00000378036 FARP1Q9Y4F1 1045 aaPredicted RBP5.63□□□□□ -1.51
MINDY3-202ENST00000378036 FKBP8Q14318 412 aa5.62□□□□□ -1.51
MINDY3-202ENST00000378036 POTEB2H3BUK9 544 aa5.61□□□□□ -1.51
MINDY3-202ENST00000378036 MKRN4PQ13434 485 aaPredicted RBP5.6□□□□□ -1.51
MINDY3-202ENST00000378036 PABPN1Q86U42 306 aaKnown RBP eCLIP5.59□□□□□ -1.51
MINDY3-202ENST00000378036 PCDH10Q9P2E7 1040 aa5.58□□□□□ -1.52
MINDY3-202ENST00000378036 ZNF579Q8NAF0 562 aaKnown RBP5.56□□□□□ -1.52
MINDY3-202ENST00000378036 GALR2O43603 387 aaPredicted RBP5.56□□□□□ -1.52
MINDY3-202ENST00000378036 ZRANB1Q9UGI0 708 aa5.55□□□□□ -1.52
MINDY3-202ENST00000378036 RTN4Q9NQC3 1192 aaKnown RBP5.49□□□□□ -1.53
MINDY3-202ENST00000378036 PELP1Q8IZL8 1130 aaKnown RBP5.48□□□□□ -1.53
MINDY3-202ENST00000378036 FAM163AQ96GL9 167 aaPredicted RBP5.48□□□□□ -1.53
MINDY3-202ENST00000378036 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
MINDY3-202ENST00000378036 NISCHQ9Y2I1 1504 aa5.47□□□□□ -1.53
MINDY3-202ENST00000378036 POTEJP0CG39 1038 aa5.45□□□□□ -1.54
MINDY3-202ENST00000378036 PHF12Q96QT6 1004 aa5.45□□□□□ -1.54
MINDY3-202ENST00000378036 METRNQ9UJH8 293 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms