RNA–Protein interactions for RNA: ENST00000641285.1

PNPO-209, Transcript of pyridoxamine 5'-phosphate oxidase, human

Gene PNPO, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPO-209	ENST00000641285	NISCH	Q9Y2I1	1504 aa		22.87	■■□□□ 1.25
PNPO-209	ENST00000641285	CCDC180	Q9P1Z9	1646 aa		20.35	■□□□□ 0.85
PNPO-209	ENST00000641285	ABCC9	O60706	1549 aa		20.27	■□□□□ 0.84
PNPO-209	ENST00000641285	DCAF8L2	P0C7V8	631 aa		19.4	■□□□□ 0.7
PNPO-209	ENST00000641285	RB1CC1	Q8TDY2	1594 aa		19.31	■□□□□ 0.68
PNPO-209	ENST00000641285	NACAD	O15069	1562 aa		19.21	■□□□□ 0.67
PNPO-209	ENST00000641285	ZCCHC6	Q5VYS8	1495 aa	Known RBP	18.99	■□□□□ 0.63
PNPO-209	ENST00000641285	PABPN1	Q86U42	306 aa	Known RBP eCLIP	18.97	■□□□□ 0.63
PNPO-209	ENST00000641285	MYO15B	Q96JP2	1530 aa		18.95	■□□□□ 0.62
PNPO-209	ENST00000641285	UNC13A	Q9UPW8	1703 aa		18.87	■□□□□ 0.61
PNPO-209	ENST00000641285	DCAF1	Q9Y4B6	1507 aa		18.83	■□□□□ 0.6
PNPO-209	ENST00000641285	DNAJC5B	Q9UF47	199 aa		18.82	■□□□□ 0.6
PNPO-209	ENST00000641285	BICRA	Q9NZM4	1560 aa		18.74	■□□□□ 0.59
PNPO-209	ENST00000641285	SCRIB	Q14160	1630 aa		18.69	■□□□□ 0.58
PNPO-209	ENST00000641285	SHROOM4	Q9ULL8	1493 aa		18.41	■□□□□ 0.54
PNPO-209	ENST00000641285	EIF4G1	Q04637	1599 aa	Known RBP	18.28	■□□□□ 0.52
PNPO-209	ENST00000641285	CC2D2A	Q9P2K1	1620 aa		18.27	■□□□□ 0.52
PNPO-209	ENST00000641285	CECR2	Q9BXF3	1484 aa		18.2	■□□□□ 0.5
PNPO-209	ENST00000641285	SMARCA4	P51532	1647 aa		17.79	■□□□□ 0.44
PNPO-209	ENST00000641285	ATAD2B	Q9ULI0	1458 aa		17.76	■□□□□ 0.43
PNPO-209	ENST00000641285	NCAPD3	P42695	1498 aa		17.75	■□□□□ 0.43
PNPO-209	ENST00000641285	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	17.72	■□□□□ 0.43
PNPO-209	ENST00000641285	SMARCA2	P51531	1590 aa		17.7	■□□□□ 0.42
PNPO-209	ENST00000641285	MROH2B	Q7Z745	1585 aa		17.66	■□□□□ 0.42
PNPO-209	ENST00000641285	BAZ1B	Q9UIG0	1483 aa	Known RBP	17.62	■□□□□ 0.41
PNPO-209	ENST00000641285	HMGXB3	Q12766	1538 aa		17.62	■□□□□ 0.41
PNPO-209	ENST00000641285	PEG3	Q9GZU2	1588 aa		17.55	■□□□□ 0.4
PNPO-209	ENST00000641285	ERCC6	Q03468	1493 aa		17.49	■□□□□ 0.39
PNPO-209	ENST00000641285	NES	P48681	1621 aa		17.47	■□□□□ 0.39
PNPO-209	ENST00000641285	WIZ	O95785	1651 aa		17.47	■□□□□ 0.39
PNPO-209	ENST00000641285	RSF1	Q96T23	1441 aa	Predicted RBP	17.37	■□□□□ 0.37
PNPO-209	ENST00000641285	LAMC3	Q9Y6N6	1575 aa		17.3	■□□□□ 0.36
PNPO-209	ENST00000641285	CUX2	O14529	1486 aa		17.28	■□□□□ 0.36
PNPO-209	ENST00000641285	CADPS	Q9ULU8	1353 aa		17.26	■□□□□ 0.35
PNPO-209	ENST00000641285	PDS5B	Q9NTI5	1447 aa		17.23	■□□□□ 0.35
PNPO-209	ENST00000641285	TOP2A	P11388	1531 aa	Known RBP	17.22	■□□□□ 0.35
PNPO-209	ENST00000641285	KIF21A	Q7Z4S6	1674 aa		17.22	■□□□□ 0.35
PNPO-209	ENST00000641285	THOC2	Q8NI27	1593 aa	Known RBP	17.18	■□□□□ 0.34
PNPO-209	ENST00000641285	CFTR	P13569	1480 aa		17.08	■□□□□ 0.32
PNPO-209	ENST00000641285	FANCD2	Q9BXW9	1451 aa		17.07	■□□□□ 0.32
PNPO-209	ENST00000641285	MRC2	Q9UBG0	1479 aa		17.07	■□□□□ 0.32
PNPO-209	ENST00000641285	CCDC88B	A6NC98	1476 aa		17.06	■□□□□ 0.32
PNPO-209	ENST00000641285	CEP164	Q9UPV0	1460 aa		17.06	■□□□□ 0.32
PNPO-209	ENST00000641285	DNAJC5	Q9H3Z4	198 aa		17.06	■□□□□ 0.32
PNPO-209	ENST00000641285	WDR62	O43379	1518 aa		17	■□□□□ 0.31
PNPO-209	ENST00000641285	SUPT5H	O00267	1087 aa	Known RBP	16.92	■□□□□ 0.3
PNPO-209	ENST00000641285	URB2	Q14146	1524 aa	Known RBP	16.91	■□□□□ 0.3
PNPO-209	ENST00000641285	PRDM2	Q13029	1718 aa		16.89	■□□□□ 0.29
PNPO-209	ENST00000641285	TOPBP1	Q92547	1522 aa		16.76	■□□□□ 0.27
PNPO-209	ENST00000641285	DNMBP	Q6XZF7	1577 aa		16.7	■□□□□ 0.26
PNPO-209	ENST00000641285	ZNF608	Q9ULD9	1512 aa	Predicted RBP	16.7	■□□□□ 0.26
PNPO-209	ENST00000641285	ABCC8	Q09428	1581 aa		16.69	■□□□□ 0.26
PNPO-209	ENST00000641285	IFT140	Q96RY7	1462 aa		16.69	■□□□□ 0.26
PNPO-209	ENST00000641285	OSCAR	Q8IYS5	282 aa		16.61	■□□□□ 0.25
PNPO-209	ENST00000641285	POLA1	P09884	1462 aa	Predicted RBP	16.61	■□□□□ 0.25
PNPO-209	ENST00000641285	RAD54L2	Q9Y4B4	1467 aa		16.6	■□□□□ 0.25
PNPO-209	ENST00000641285	AQR	O60306	1485 aa	Known RBP eCLIP	16.59	■□□□□ 0.25	3e-6	■■□□□ 11.9
PNPO-209	ENST00000641285	TARBP1	Q13395	1621 aa	Known RBP	16.57	■□□□□ 0.24
PNPO-209	ENST00000641285	EIF4G3	O43432	1585 aa	Known RBP	16.57	■□□□□ 0.24
PNPO-209	ENST00000641285	CUX1	P39880	1505 aa		16.57	■□□□□ 0.24
PNPO-209	ENST00000641285	SOGA1	O94964	1423 aa		16.57	■□□□□ 0.24
PNPO-209	ENST00000641285	FGD5	Q6ZNL6	1462 aa		16.55	■□□□□ 0.24
PNPO-209	ENST00000641285	TRIM41	Q8WV44	630 aa		16.54	■□□□□ 0.24
PNPO-209	ENST00000641285	TDRD9	Q8NDG6	1382 aa	Known RBP	16.53	■□□□□ 0.24
PNPO-209	ENST00000641285	FBLN2	P98095	1184 aa		16.51	■□□□□ 0.23
PNPO-209	ENST00000641285	CHD1	O14646	1710 aa		16.42	■□□□□ 0.22
PNPO-209	ENST00000641285	SNAPC4	Q5SXM2	1469 aa		16.41	■□□□□ 0.22
PNPO-209	ENST00000641285	WRN	Q14191	1432 aa	Predicted RBP eCLIP	16.39	■□□□□ 0.21
PNPO-209	ENST00000641285	CHMP7	Q8WUX9	453 aa	Predicted RBP	16.37	■□□□□ 0.21
PNPO-209	ENST00000641285	SYNJ1	O43426	1573 aa		16.37	■□□□□ 0.21
PNPO-209	ENST00000641285	GRIN2B	Q13224	1484 aa		16.36	■□□□□ 0.21
PNPO-209	ENST00000641285	WDR97	A6NE52	1622 aa		16.36	■□□□□ 0.21
PNPO-209	ENST00000641285	GAPVD1	Q14C86	1478 aa		16.35	■□□□□ 0.21
PNPO-209	ENST00000641285	ABCA10	Q8WWZ4	1543 aa		16.35	■□□□□ 0.21
PNPO-209	ENST00000641285	RIMBP3C	A6NJZ7	1639 aa		16.34	■□□□□ 0.21
PNPO-209	ENST00000641285	RIMBP3B	A6NNM3	1639 aa		16.34	■□□□□ 0.21
PNPO-209	ENST00000641285	TOP2B	Q02880	1626 aa		16.34	■□□□□ 0.21
PNPO-209	ENST00000641285	RIMBP3	Q9UFD9	1639 aa		16.34	■□□□□ 0.21
PNPO-209	ENST00000641285	BIVM-ERCC5	R4GMW8	1640 aa		16.32	■□□□□ 0.2
PNPO-209	ENST00000641285	PBRM1	Q86U86	1689 aa		16.31	■□□□□ 0.2
PNPO-209	ENST00000641285	ARHGEF11	O15085	1522 aa		16.31	■□□□□ 0.2
PNPO-209	ENST00000641285	MAGI1	Q96QZ7	1491 aa	Predicted RBP	16.31	■□□□□ 0.2
PNPO-209	ENST00000641285	ABCA5	Q8WWZ7	1642 aa		16.29	■□□□□ 0.2
PNPO-209	ENST00000641285	SYNJ2	O15056	1496 aa		16.28	■□□□□ 0.2
PNPO-209	ENST00000641285	CYB5RL	Q6IPT4	315 aa		16.26	■□□□□ 0.19
PNPO-209	ENST00000641285	CLASP1	Q7Z460	1538 aa		16.19	■□□□□ 0.18
PNPO-209	ENST00000641285	ARAP1	Q96P48	1450 aa		16.17	■□□□□ 0.18
PNPO-209	ENST00000641285	ADAMTS12	P58397	1594 aa		16.17	■□□□□ 0.18
PNPO-209	ENST00000641285	GRIN2A	Q12879	1464 aa		16.16	■□□□□ 0.18
PNPO-209	ENST00000641285	FHAD1	B1AJZ9	1412 aa		16.14	■□□□□ 0.17
PNPO-209	ENST00000641285	ERICH3	Q5RHP9	1530 aa		16.13	■□□□□ 0.17
PNPO-209	ENST00000641285	CEP170	Q5SW79	1584 aa		16.09	■□□□□ 0.17
PNPO-209	ENST00000641285	NUP160	Q12769	1436 aa		16.07	■□□□□ 0.16
PNPO-209	ENST00000641285	KIF27	Q86VH2	1401 aa		16.06	■□□□□ 0.16
PNPO-209	ENST00000641285	IGF1R	P08069	1367 aa		16.03	■□□□□ 0.16
PNPO-209	ENST00000641285	TRH	P20396	242 aa	Predicted RBP	16.03	■□□□□ 0.16
PNPO-209	ENST00000641285	ERCC6L2	Q5T890	1561 aa		16.03	■□□□□ 0.16
PNPO-209	ENST00000641285	JPH4	Q96JJ6	628 aa		15.97	■□□□□ 0.15
PNPO-209	ENST00000641285	PRG4	Q92954	1404 aa	Predicted RBP	15.95	■□□□□ 0.14
PNPO-209	ENST00000641285	CARMIL1	Q5VZK9	1371 aa		15.95	■□□□□ 0.14

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms