RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
CALD1-216ENST00000473714 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
CALD1-216ENST00000473714 SENP3Q9H4L4 574 aaPredicted RBP12.82□□□□□ -0.36
CALD1-216ENST00000473714 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
CALD1-216ENST00000473714 FOXD1Q16676 465 aa11.96□□□□□ -0.49
CALD1-216ENST00000473714 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
CALD1-216ENST00000473714 MSH5O43196 834 aa11.38□□□□□ -0.59
CALD1-216ENST00000473714 PIAS4Q8N2W9 510 aaPredicted RBP11.12□□□□□ -0.63
CALD1-216ENST00000473714 PLPPR3Q6T4P5 718 aa10.91□□□□□ -0.66
CALD1-216ENST00000473714 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
CALD1-216ENST00000473714 ADRA2BP18089 450 aa10.86□□□□□ -0.67
CALD1-216ENST00000473714 MAPK8IP2Q13387 824 aaPredicted RBP10.08□□□□□ -0.8
CALD1-216ENST00000473714 DMRT2Q9Y5R5 561 aa10.08□□□□□ -0.8
CALD1-216ENST00000473714 SCAF1Q9H7N4 1312 aaKnown RBP10.02□□□□□ -0.81
CALD1-216ENST00000473714 CACNB1Q02641 598 aaPredicted RBP10.01□□□□□ -0.81
CALD1-216ENST00000473714 DCAF8L1A6NGE4 600 aa9.77□□□□□ -0.85
CALD1-216ENST00000473714 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
CALD1-216ENST00000473714 HOXD11P31277 338 aaPredicted RBP9.57□□□□□ -0.88
CALD1-216ENST00000473714 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
CALD1-216ENST00000473714 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
CALD1-216ENST00000473714 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
CALD1-216ENST00000473714 RNF216Q9NWF9 866 aaPredicted RBP9.42□□□□□ -0.9
CALD1-216ENST00000473714 DNAJC5BQ9UF47 199 aa9.33□□□□□ -0.92
CALD1-216ENST00000473714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.18□□□□□ -0.947e-7■■■□□ 19.1
CALD1-216ENST00000473714 POTEHQ6S545 545 aa9.11□□□□□ -0.95
CALD1-216ENST00000473714 NCBP3Q53F19 620 aaKnown RBP9.09□□□□□ -0.95
CALD1-216ENST00000473714 CAPN15O75808 1086 aa8.93□□□□□ -0.98
CALD1-216ENST00000473714 DSG3P32926 999 aa8.91□□□□□ -0.98
CALD1-216ENST00000473714 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
CALD1-216ENST00000473714 NPM3O75607 178 aaKnown RBP8.87□□□□□ -0.99
CALD1-216ENST00000473714 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
CALD1-216ENST00000473714 TRHP20396 242 aaPredicted RBP8.69□□□□□ -1.02
CALD1-216ENST00000473714 APLP2Q06481 763 aa8.69□□□□□ -1.02
CALD1-216ENST00000473714 ZNF219Q9P2Y4 722 aaPredicted RBP8.66□□□□□ -1.02
CALD1-216ENST00000473714 ABCB7O75027 752 aa8.65□□□□□ -1.02
CALD1-216ENST00000473714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.58□□□□□ -1.04
CALD1-216ENST00000473714 HNRNPUL2Q1KMD3 747 aaKnown RBP8.58□□□□□ -1.04
CALD1-216ENST00000473714 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
CALD1-216ENST00000473714 SLC4A2P04920 1241 aa8.56□□□□□ -1.04
CALD1-216ENST00000473714 CHRDL2Q6WN34 429 aa8.5□□□□□ -1.05
CALD1-216ENST00000473714 SAMD1Q6SPF0 538 aaPredicted RBP8.49□□□□□ -1.05
CALD1-216ENST00000473714 KCNA4P22459 653 aa8.38□□□□□ -1.07
CALD1-216ENST00000473714 SP7Q8TDD2 431 aaPredicted RBP8.37□□□□□ -1.07
CALD1-216ENST00000473714 POLA2Q14181 598 aa8.36□□□□□ -1.07
CALD1-216ENST00000473714 AKT1S1Q96B36 256 aa8.27□□□□□ -1.09
CALD1-216ENST00000473714 MYCNP04198 464 aaPredicted RBP8.24□□□□□ -1.09
CALD1-216ENST00000473714 HAX1O00165 279 aa8.21□□□□□ -1.1
CALD1-216ENST00000473714 PIP4P2Q8N4L2 257 aa8.19□□□□□ -1.1
CALD1-216ENST00000473714 REM2Q8IYK8 340 aaPredicted RBP8.18□□□□□ -1.1
CALD1-216ENST00000473714 ZBTB12Q9Y330 459 aaPredicted RBP8.18□□□□□ -1.1
CALD1-216ENST00000473714 PITPNM1O00562 1244 aa8.08□□□□□ -1.12
CALD1-216ENST00000473714 FXR2P51116 673 aaKnown RBP eCLIP8.08□□□□□ -1.12
CALD1-216ENST00000473714 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
CALD1-216ENST00000473714 ATF5Q9Y2D1 282 aaPredicted RBP8.04□□□□□ -1.12
CALD1-216ENST00000473714 EVX2Q03828 476 aa7.99□□□□□ -1.13
CALD1-216ENST00000473714 FOXD4L1Q9NU39 408 aa7.96□□□□□ -1.14
CALD1-216ENST00000473714 SPDYE2BA6NHP3 402 aa7.89□□□□□ -1.15
CALD1-216ENST00000473714 SPDYE6P0CI01 402 aa7.89□□□□□ -1.15
CALD1-216ENST00000473714 PRKAR2AP13861 404 aaKnown RBP7.89□□□□□ -1.15
CALD1-216ENST00000473714 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
CALD1-216ENST00000473714 SLC4A1APQ9BWU0 796 aaKnown RBP7.88□□□□□ -1.15
CALD1-216ENST00000473714 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
CALD1-216ENST00000473714 LHX8Q68G74 356 aa7.86□□□□□ -1.15
CALD1-216ENST00000473714 SPDYE1Q8NFV5 336 aaPredicted RBP7.85□□□□□ -1.15
CALD1-216ENST00000473714 C19orf67A6NJJ6 358 aa7.84□□□□□ -1.15
CALD1-216ENST00000473714 GABBR2O75899 941 aa7.84□□□□□ -1.15
CALD1-216ENST00000473714 FBLN2P98095 1184 aa7.84□□□□□ -1.15
CALD1-216ENST00000473714 ATXN8OSP0DMR3 200 aa7.76□□□□□ -1.17
CALD1-216ENST00000473714 ZNF692Q9BU19 519 aaPredicted RBP7.75□□□□□ -1.17
CALD1-216ENST00000473714 CHADLQ6NUI6 762 aa7.72□□□□□ -1.17
CALD1-216ENST00000473714 PLSCR2Q9NRY7 297 aa7.7□□□□□ -1.18
CALD1-216ENST00000473714 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
CALD1-216ENST00000473714 PRR29P0C7W0 189 aa7.69□□□□□ -1.18
CALD1-216ENST00000473714 ZBTB22O15209 634 aa7.66□□□□□ -1.18
CALD1-216ENST00000473714 MKRN4PQ13434 485 aaPredicted RBP7.64□□□□□ -1.19
CALD1-216ENST00000473714 CLCN6P51797 869 aa7.63□□□□□ -1.19
CALD1-216ENST00000473714 POTEIP0CG38 1075 aa7.62□□□□□ -1.19
CALD1-216ENST00000473714 CD44P16070 742 aaKnown RBP7.62□□□□□ -1.19
CALD1-216ENST00000473714 PABPN1Q86U42 306 aaKnown RBP eCLIP7.61□□□□□ -1.19
CALD1-216ENST00000473714 DCBLD2Q96PD2 775 aa7.59□□□□□ -1.19
CALD1-216ENST00000473714 FARP1Q9Y4F1 1045 aaPredicted RBP7.57□□□□□ -1.2
CALD1-216ENST00000473714 ZNF579Q8NAF0 562 aaKnown RBP7.47□□□□□ -1.21
CALD1-216ENST00000473714 ZRANB1Q9UGI0 708 aa7.47□□□□□ -1.21
CALD1-216ENST00000473714 OTUD5Q96G74 571 aa7.43□□□□□ -1.22
CALD1-216ENST00000473714 POTEMA6NI47 508 aa7.41□□□□□ -1.22
CALD1-216ENST00000473714 GALR2O43603 387 aaPredicted RBP7.39□□□□□ -1.23
CALD1-216ENST00000473714 POTEGQ6S5H5 508 aa7.38□□□□□ -1.23
CALD1-216ENST00000473714 PAK3O75914 559 aaPredicted RBP7.37□□□□□ -1.23
CALD1-216ENST00000473714 POTEB2H3BUK9 544 aa7.36□□□□□ -1.23
CALD1-216ENST00000473714 STAG3Q9UJ98 1225 aa7.36□□□□□ -1.23
CALD1-216ENST00000473714 CREBZFQ9NS37 354 aa7.35□□□□□ -1.23
CALD1-216ENST00000473714 PCDH10Q9P2E7 1040 aa7.35□□□□□ -1.23
CALD1-216ENST00000473714 PHF12Q96QT6 1004 aa7.3□□□□□ -1.24
CALD1-216ENST00000473714 NPM1P06748 294 aaKnown RBP eCLIP7.28□□□□□ -1.24
CALD1-216ENST00000473714 PELP1Q8IZL8 1130 aaKnown RBP7.28□□□□□ -1.24
CALD1-216ENST00000473714 MAMSTRQ6ZN01 415 aa7.27□□□□□ -1.25
CALD1-216ENST00000473714 C7P10643 843 aa7.25□□□□□ -1.25
CALD1-216ENST00000473714 METRNQ9UJH8 293 aa7.25□□□□□ -1.25
CALD1-216ENST00000473714 SLC39A7Q92504 469 aa7.24□□□□□ -1.25
CALD1-216ENST00000473714 ASTLQ6HA08 431 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms