RNA–Protein interactions for RNA: ENST00000595700.5

SMG9-203, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-203ENST00000595700 NISCHQ9Y2I1 1504 aa36.49■■■■□ 3.43
SMG9-203ENST00000595700 CCDC180Q9P1Z9 1646 aa32.65■■■□□ 2.82
SMG9-203ENST00000595700 ABCC9O60706 1549 aa32.21■■■□□ 2.75
SMG9-203ENST00000595700 RB1CC1Q8TDY2 1594 aa30.84■■■□□ 2.53
SMG9-203ENST00000595700 NACADO15069 1562 aa30.7■■■□□ 2.51
SMG9-203ENST00000595700 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
SMG9-203ENST00000595700 MYO15BQ96JP2 1530 aa30.37■■■□□ 2.45
SMG9-203ENST00000595700 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
SMG9-203ENST00000595700 UNC13AQ9UPW8 1703 aa30.26■■■□□ 2.44
SMG9-203ENST00000595700 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
SMG9-203ENST00000595700 PABPN1Q86U42 306 aaKnown RBP eCLIP30■■■□□ 2.39
SMG9-203ENST00000595700 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
SMG9-203ENST00000595700 SCRIBQ14160 1630 aa29.79■■■□□ 2.36
SMG9-203ENST00000595700 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
SMG9-203ENST00000595700 SHROOM4Q9ULL8 1493 aa29.53■■■□□ 2.32
SMG9-203ENST00000595700 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
SMG9-203ENST00000595700 CC2D2AQ9P2K1 1620 aa29.15■■■□□ 2.26
SMG9-203ENST00000595700 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
SMG9-203ENST00000595700 SMARCA4P51532 1647 aa28.43■■■□□ 2.14
SMG9-203ENST00000595700 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
SMG9-203ENST00000595700 ATAD2BQ9ULI0 1458 aa28.3■■■□□ 2.12
SMG9-203ENST00000595700 NCAPD3P42695 1498 aa28.29■■■□□ 2.12
SMG9-203ENST00000595700 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
SMG9-203ENST00000595700 HMGXB3Q12766 1538 aa28.19■■■□□ 2.1
SMG9-203ENST00000595700 MROH2BQ7Z745 1585 aa28.15■■■□□ 2.1
SMG9-203ENST00000595700 PEG3Q9GZU2 1588 aa28.12■■■□□ 2.09
SMG9-203ENST00000595700 BAZ1BQ9UIG0 1483 aaKnown RBP28.08■■■□□ 2.08
SMG9-203ENST00000595700 WIZO95785 1651 aa27.88■■■□□ 2.05
SMG9-203ENST00000595700 NESP48681 1621 aa27.79■■■□□ 2.04
SMG9-203ENST00000595700 ERCC6Q03468 1493 aa27.77■■■□□ 2.04
SMG9-203ENST00000595700 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
SMG9-203ENST00000595700 LAMC3Q9Y6N6 1575 aa27.66■■■□□ 2.02
SMG9-203ENST00000595700 CUX2O14529 1486 aa27.57■■■□□ 2
SMG9-203ENST00000595700 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
SMG9-203ENST00000595700 TOP2AP11388 1531 aaKnown RBP27.52■■■□□ 2
SMG9-203ENST00000595700 THOC2Q8NI27 1593 aaKnown RBP27.48■■□□□ 1.99
SMG9-203ENST00000595700 CADPSQ9ULU8 1353 aa27.45■■□□□ 1.99
SMG9-203ENST00000595700 PDS5BQ9NTI5 1447 aa27.43■■□□□ 1.98
SMG9-203ENST00000595700 CFTRP13569 1480 aa27.25■■□□□ 1.95
SMG9-203ENST00000595700 MRC2Q9UBG0 1479 aa27.22■■□□□ 1.95
SMG9-203ENST00000595700 CEP164Q9UPV0 1460 aa27.19■■□□□ 1.94
SMG9-203ENST00000595700 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
SMG9-203ENST00000595700 PRDM2Q13029 1718 aa27.17■■□□□ 1.94
SMG9-203ENST00000595700 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
SMG9-203ENST00000595700 WDR62O43379 1518 aa27.15■■□□□ 1.94
SMG9-203ENST00000595700 DNAJC5Q9H3Z4 198 aa27.02■■□□□ 1.92
SMG9-203ENST00000595700 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
SMG9-203ENST00000595700 SUPT5HO00267 1087 aaKnown RBP26.73■■□□□ 1.87
SMG9-203ENST00000595700 TOPBP1Q92547 1522 aa26.73■■□□□ 1.87
SMG9-203ENST00000595700 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
SMG9-203ENST00000595700 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
SMG9-203ENST00000595700 IFT140Q96RY7 1462 aa26.61■■□□□ 1.85
SMG9-203ENST00000595700 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
SMG9-203ENST00000595700 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
SMG9-203ENST00000595700 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
SMG9-203ENST00000595700 POLA1P09884 1462 aaPredicted RBP26.48■■□□□ 1.83
SMG9-203ENST00000595700 CUX1P39880 1505 aa26.43■■□□□ 1.82
SMG9-203ENST00000595700 FGD5Q6ZNL6 1462 aa26.38■■□□□ 1.81
SMG9-203ENST00000595700 RAD54L2Q9Y4B4 1467 aa26.38■■□□□ 1.81
SMG9-203ENST00000595700 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.813e-10■■■■■ 43
SMG9-203ENST00000595700 SOGA1O94964 1423 aa26.32■■□□□ 1.8
SMG9-203ENST00000595700 OSCARQ8IYS5 282 aa26.31■■□□□ 1.8
SMG9-203ENST00000595700 WDR97A6NE52 1622 aa26.26■■□□□ 1.79
SMG9-203ENST00000595700 CHD1O14646 1710 aa26.25■■□□□ 1.79
SMG9-203ENST00000595700 TDRD9Q8NDG6 1382 aaKnown RBP26.23■■□□□ 1.79
SMG9-203ENST00000595700 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
SMG9-203ENST00000595700 SNAPC4Q5SXM2 1469 aa26.13■■□□□ 1.77
SMG9-203ENST00000595700 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
SMG9-203ENST00000595700 PBRM1Q86U86 1689 aa26.13■■□□□ 1.77
SMG9-203ENST00000595700 TOP2BQ02880 1626 aa26.12■■□□□ 1.77
SMG9-203ENST00000595700 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
SMG9-203ENST00000595700 TRIM41Q8WV44 630 aa26.08■■□□□ 1.77
SMG9-203ENST00000595700 ABCA10Q8WWZ4 1543 aa26.08■■□□□ 1.77
SMG9-203ENST00000595700 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
SMG9-203ENST00000595700 RIMBP3CA6NJZ7 1639 aa26.07■■□□□ 1.76
SMG9-203ENST00000595700 RIMBP3BA6NNM3 1639 aa26.07■■□□□ 1.76
SMG9-203ENST00000595700 ABCA5Q8WWZ7 1642 aa26.07■■□□□ 1.76
SMG9-203ENST00000595700 RIMBP3Q9UFD9 1639 aa26.07■■□□□ 1.76
SMG9-203ENST00000595700 FBLN2P98095 1184 aa26.06■■□□□ 1.76
SMG9-203ENST00000595700 GAPVD1Q14C86 1478 aa26.04■■□□□ 1.76
SMG9-203ENST00000595700 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
SMG9-203ENST00000595700 ARHGEF11O15085 1522 aa25.99■■□□□ 1.75
SMG9-203ENST00000595700 SYNJ2O15056 1496 aa25.95■■□□□ 1.74
SMG9-203ENST00000595700 CHMP7Q8WUX9 453 aaPredicted RBP25.92■■□□□ 1.74
SMG9-203ENST00000595700 CLASP1Q7Z460 1538 aa25.89■■□□□ 1.74
SMG9-203ENST00000595700 ADAMTS12P58397 1594 aa25.85■■□□□ 1.73
SMG9-203ENST00000595700 ERICH3Q5RHP9 1530 aa25.77■■□□□ 1.72
SMG9-203ENST00000595700 GRIN2AQ12879 1464 aa25.75■■□□□ 1.71
SMG9-203ENST00000595700 ARAP1Q96P48 1450 aa25.75■■□□□ 1.71
SMG9-203ENST00000595700 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
SMG9-203ENST00000595700 CYB5RLQ6IPT4 315 aa25.69■■□□□ 1.7
SMG9-203ENST00000595700 CEP170Q5SW79 1584 aa25.68■■□□□ 1.7
SMG9-203ENST00000595700 NUP160Q12769 1436 aa25.63■■□□□ 1.69
SMG9-203ENST00000595700 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
SMG9-203ENST00000595700 SHROOM2Q13796 1616 aa25.53■■□□□ 1.68
SMG9-203ENST00000595700 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
SMG9-203ENST00000595700 CUL7Q14999 1698 aa25.53■■□□□ 1.68
SMG9-203ENST00000595700 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
SMG9-203ENST00000595700 IGF1RP08069 1367 aa25.47■■□□□ 1.67
SMG9-203ENST00000595700 PRG4Q92954 1404 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms