RNA–Protein interactions for RNA: ENST00000642017.1

PNPO-217, Transcript of pyridoxamine 5'-phosphate oxidase, humanhuman

APPRIS P1 BASIC

Gene PNPO, Length 3,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPO-217ENST00000642017 NISCHQ9Y2I1 1504 aa26.39■■□□□ 1.81
PNPO-217ENST00000642017 SHROOM4Q9ULL8 1493 aa22.88■■□□□ 1.25
PNPO-217ENST00000642017 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
PNPO-217ENST00000642017 CCDC180Q9P1Z9 1646 aa22.36■■□□□ 1.17
PNPO-217ENST00000642017 SUPT5HO00267 1087 aaKnown RBP22.27■■□□□ 1.16
PNPO-217ENST00000642017 ZCCHC6Q5VYS8 1495 aaKnown RBP22.19■■□□□ 1.14
PNPO-217ENST00000642017 ABCC9O60706 1549 aa21.6■■□□□ 1.05
PNPO-217ENST00000642017 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
PNPO-217ENST00000642017 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
PNPO-217ENST00000642017 PELP1Q8IZL8 1130 aaKnown RBP21.34■■□□□ 1.01
PNPO-217ENST00000642017 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
PNPO-217ENST00000642017 MYO15BQ96JP2 1530 aa20.99■□□□□ 0.95
PNPO-217ENST00000642017 MYT1Q01538 1121 aa20.97■□□□□ 0.95
PNPO-217ENST00000642017 NACADO15069 1562 aa20.86■□□□□ 0.93
PNPO-217ENST00000642017 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
PNPO-217ENST00000642017 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
PNPO-217ENST00000642017 EHMT2Q96KQ7 1210 aa20.78■□□□□ 0.92
PNPO-217ENST00000642017 LOC105371045A0A1W2PR82 267 aa20.77■□□□□ 0.92
PNPO-217ENST00000642017 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
PNPO-217ENST00000642017 FAM9AQ8IZU1 332 aaPredicted RBP20.7■□□□□ 0.9
PNPO-217ENST00000642017 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
PNPO-217ENST00000642017 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
PNPO-217ENST00000642017 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
PNPO-217ENST00000642017 WIZO95785 1651 aa20.51■□□□□ 0.87
PNPO-217ENST00000642017 PRKCSHP14314 528 aaPredicted RBP20.49■□□□□ 0.87
PNPO-217ENST00000642017 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
PNPO-217ENST00000642017 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
PNPO-217ENST00000642017 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.84
PNPO-217ENST00000642017 SMARCA4P51532 1647 aa20.17■□□□□ 0.82
PNPO-217ENST00000642017 BICRAQ9NZM4 1560 aa20.13■□□□□ 0.81
PNPO-217ENST00000642017 TTBK1Q5TCY1 1321 aaPredicted RBP20.12■□□□□ 0.81
PNPO-217ENST00000642017 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
PNPO-217ENST00000642017 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
PNPO-217ENST00000642017 ABCC8Q09428 1581 aa20.05■□□□□ 0.8
PNPO-217ENST00000642017 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
PNPO-217ENST00000642017 SMARCA2P51531 1590 aa19.95■□□□□ 0.78
PNPO-217ENST00000642017 SLC24A1O60721 1099 aa19.93■□□□□ 0.78
PNPO-217ENST00000642017 HRCP23327 699 aa19.89■□□□□ 0.77
PNPO-217ENST00000642017 TRIM26Q12899 539 aaPredicted RBP19.82■□□□□ 0.76
PNPO-217ENST00000642017 BAZ1BQ9UIG0 1483 aaKnown RBP19.8■□□□□ 0.76
PNPO-217ENST00000642017 EIF4G1Q04637 1599 aaKnown RBP19.8■□□□□ 0.76
PNPO-217ENST00000642017 ATAD2BQ9ULI0 1458 aa19.79■□□□□ 0.76
PNPO-217ENST00000642017 SOGA1O94964 1423 aa19.79■□□□□ 0.76
PNPO-217ENST00000642017 RANGAP1P46060 587 aaPredicted RBP19.79■□□□□ 0.76
PNPO-217ENST00000642017 BCL11AQ9H165 835 aa19.77■□□□□ 0.76
PNPO-217ENST00000642017 UBTFP17480 764 aaKnown RBP19.76■□□□□ 0.75
PNPO-217ENST00000642017 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
PNPO-217ENST00000642017 ERICH6Q7L0X2 663 aa19.69■□□□□ 0.74
PNPO-217ENST00000642017 WRNQ14191 1432 aaPredicted RBP eCLIP19.65■□□□□ 0.74
PNPO-217ENST00000642017 APLP2Q06481 763 aa19.63■□□□□ 0.73
PNPO-217ENST00000642017 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
PNPO-217ENST00000642017 SCAF1Q9H7N4 1312 aaKnown RBP19.59■□□□□ 0.73
PNPO-217ENST00000642017 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.72
PNPO-217ENST00000642017 SYNJ1O43426 1573 aa19.52■□□□□ 0.72
PNPO-217ENST00000642017 CEP162Q5TB80 1403 aa19.47■□□□□ 0.71
PNPO-217ENST00000642017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.39■□□□□ 0.7
PNPO-217ENST00000642017 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
PNPO-217ENST00000642017 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.69
PNPO-217ENST00000642017 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
PNPO-217ENST00000642017 EEA1Q15075 1411 aa19.3■□□□□ 0.68
PNPO-217ENST00000642017 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
PNPO-217ENST00000642017 CCER1Q8TC90 406 aaPredicted RBP19.26■□□□□ 0.67
PNPO-217ENST00000642017 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
PNPO-217ENST00000642017 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
PNPO-217ENST00000642017 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
PNPO-217ENST00000642017 DNAJC5BQ9UF47 199 aa19.21■□□□□ 0.67
PNPO-217ENST00000642017 CLIP1P30622 1438 aa19.2■□□□□ 0.66
PNPO-217ENST00000642017 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
PNPO-217ENST00000642017 CUX1P39880 1505 aa19.19■□□□□ 0.66
PNPO-217ENST00000642017 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
PNPO-217ENST00000642017 CFTRP13569 1480 aa19.15■□□□□ 0.66
PNPO-217ENST00000642017 CADPSQ9ULU8 1353 aa19.11■□□□□ 0.65
PNPO-217ENST00000642017 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
PNPO-217ENST00000642017 NESP48681 1621 aa19.09■□□□□ 0.65
PNPO-217ENST00000642017 KIF21BO75037 1637 aa19.05■□□□□ 0.64
PNPO-217ENST00000642017 KIF27Q86VH2 1401 aa19.05■□□□□ 0.64
PNPO-217ENST00000642017 CUX2O14529 1486 aa19.05■□□□□ 0.64
PNPO-217ENST00000642017 BIVM-ERCC5R4GMW8 1640 aa19.04■□□□□ 0.64
PNPO-217ENST00000642017 P3H3Q8IVL6 736 aa19.04■□□□□ 0.64
PNPO-217ENST00000642017 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.64
PNPO-217ENST00000642017 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
PNPO-217ENST00000642017 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
PNPO-217ENST00000642017 VPS8Q8N3P4 1428 aa18.97■□□□□ 0.63
PNPO-217ENST00000642017 ITGAEP38570 1179 aa18.94■□□□□ 0.62
PNPO-217ENST00000642017 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
PNPO-217ENST00000642017 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
PNPO-217ENST00000642017 KANK4Q5T7N3 995 aaPredicted RBP18.93■□□□□ 0.62
PNPO-217ENST00000642017 IGF1RP08069 1367 aa18.88■□□□□ 0.61
PNPO-217ENST00000642017 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
PNPO-217ENST00000642017 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
PNPO-217ENST00000642017 ARAP1Q96P48 1450 aa18.85■□□□□ 0.61
PNPO-217ENST00000642017 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.61
PNPO-217ENST00000642017 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
PNPO-217ENST00000642017 EIF5BO60841 1220 aaKnown RBP18.8■□□□□ 0.6
PNPO-217ENST00000642017 ERICH3Q5RHP9 1530 aa18.8■□□□□ 0.6
PNPO-217ENST00000642017 PRDM2Q13029 1718 aa18.78■□□□□ 0.6
PNPO-217ENST00000642017 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
PNPO-217ENST00000642017 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
PNPO-217ENST00000642017 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
PNPO-217ENST00000642017 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms