RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 NISCHQ9Y2I1 1504 aa46.94■■■■■ 5.1
KATNB1-202ENST00000562542 ABCC9O60706 1549 aa43.19■■■■■ 4.5
KATNB1-202ENST00000562542 CCDC180Q9P1Z9 1646 aa42.4■■■■■ 4.38
KATNB1-202ENST00000562542 DNAJC5BQ9UF47 199 aa41.07■■■■■ 4.17
KATNB1-202ENST00000562542 RB1CC1Q8TDY2 1594 aa40.76■■■■■ 4.12
KATNB1-202ENST00000562542 NACADO15069 1562 aa40.28■■■■■ 4.04
KATNB1-202ENST00000562542 PABPN1Q86U42 306 aaKnown RBP eCLIP40.13■■■■■ 4.01
KATNB1-202ENST00000562542 DCAF8L2P0C7V8 631 aa40.11■■■■■ 4.01
KATNB1-202ENST00000562542 UNC13AQ9UPW8 1703 aa39.75■■■■□ 3.95
KATNB1-202ENST00000562542 BICRAQ9NZM4 1560 aa39.53■■■■□ 3.92
KATNB1-202ENST00000562542 MYO15BQ96JP2 1530 aa39.43■■■■□ 3.9
KATNB1-202ENST00000562542 CECR2Q9BXF3 1484 aa38.97■■■■□ 3.83
KATNB1-202ENST00000562542 SHROOM4Q9ULL8 1493 aa38.93■■■■□ 3.82
KATNB1-202ENST00000562542 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
KATNB1-202ENST00000562542 ZCCHC6Q5VYS8 1495 aaKnown RBP38.74■■■■□ 3.79
KATNB1-202ENST00000562542 SCRIBQ14160 1630 aa38.68■■■■□ 3.78
KATNB1-202ENST00000562542 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
KATNB1-202ENST00000562542 EIF4G1Q04637 1599 aaKnown RBP38.67■■■■□ 3.78
KATNB1-202ENST00000562542 DNAJC5Q9H3Z4 198 aa38.25■■■■□ 3.71
KATNB1-202ENST00000562542 CUX2O14529 1486 aa37.47■■■■□ 3.59
KATNB1-202ENST00000562542 ERCC6Q03468 1493 aa37.39■■■■□ 3.58
KATNB1-202ENST00000562542 NCAPD3P42695 1498 aa37.19■■■■□ 3.54
KATNB1-202ENST00000562542 ATAD2BQ9ULI0 1458 aa37■■■■□ 3.51
KATNB1-202ENST00000562542 NESP48681 1621 aa36.87■■■■□ 3.49
KATNB1-202ENST00000562542 SMARCA2P51531 1590 aa36.87■■■■□ 3.49
KATNB1-202ENST00000562542 HMGXB3Q12766 1538 aa36.85■■■■□ 3.49
KATNB1-202ENST00000562542 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
KATNB1-202ENST00000562542 BAZ1BQ9UIG0 1483 aaKnown RBP36.65■■■■□ 3.46
KATNB1-202ENST00000562542 THOC2Q8NI27 1593 aaKnown RBP36.59■■■■□ 3.45
KATNB1-202ENST00000562542 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
KATNB1-202ENST00000562542 LAMC3Q9Y6N6 1575 aa36.48■■■■□ 3.43
KATNB1-202ENST00000562542 TRIM41Q8WV44 630 aa36.41■■■■□ 3.42
KATNB1-202ENST00000562542 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
KATNB1-202ENST00000562542 KIF21AQ7Z4S6 1674 aa36.34■■■■□ 3.41
KATNB1-202ENST00000562542 PDS5BQ9NTI5 1447 aa36.34■■■■□ 3.41
KATNB1-202ENST00000562542 MROH2BQ7Z745 1585 aa36.18■■■■□ 3.38
KATNB1-202ENST00000562542 CADPSQ9ULU8 1353 aa36.06■■■■□ 3.36
KATNB1-202ENST00000562542 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
KATNB1-202ENST00000562542 WDR62O43379 1518 aa35.95■■■■□ 3.35
KATNB1-202ENST00000562542 CEP164Q9UPV0 1460 aa35.79■■■■□ 3.32
KATNB1-202ENST00000562542 WIZO95785 1651 aa35.71■■■■□ 3.31
KATNB1-202ENST00000562542 OSCARQ8IYS5 282 aa35.7■■■■□ 3.31
KATNB1-202ENST00000562542 FANCD2Q9BXW9 1451 aa35.67■■■■□ 3.3
KATNB1-202ENST00000562542 CFTRP13569 1480 aa35.48■■■■□ 3.27
KATNB1-202ENST00000562542 URB2Q14146 1524 aaKnown RBP35.39■■■■□ 3.26
KATNB1-202ENST00000562542 RIMBP3CA6NJZ7 1639 aa35.25■■■■□ 3.23
KATNB1-202ENST00000562542 RIMBP3BA6NNM3 1639 aa35.25■■■■□ 3.23
KATNB1-202ENST00000562542 RIMBP3Q9UFD9 1639 aa35.25■■■■□ 3.23
KATNB1-202ENST00000562542 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
KATNB1-202ENST00000562542 RSF1Q96T23 1441 aaPredicted RBP35.17■■■■□ 3.22
KATNB1-202ENST00000562542 ZNF608Q9ULD9 1512 aaPredicted RBP35.09■■■■□ 3.21
KATNB1-202ENST00000562542 ARHGEF11O15085 1522 aa35.08■■■■□ 3.21
KATNB1-202ENST00000562542 IFT140Q96RY7 1462 aa35.08■■■■□ 3.21
KATNB1-202ENST00000562542 PRDM2Q13029 1718 aa35.02■■■■□ 3.2
KATNB1-202ENST00000562542 CYB5RLQ6IPT4 315 aa34.94■■■■□ 3.18
KATNB1-202ENST00000562542 TOPBP1Q92547 1522 aa34.9■■■■□ 3.18
KATNB1-202ENST00000562542 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
KATNB1-202ENST00000562542 TRHP20396 242 aaPredicted RBP34.84■■■■□ 3.17
KATNB1-202ENST00000562542 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
KATNB1-202ENST00000562542 ABCC8Q09428 1581 aa34.78■■■■□ 3.16
KATNB1-202ENST00000562542 FBLN2P98095 1184 aa34.72■■■■□ 3.15
KATNB1-202ENST00000562542 CHD1O14646 1710 aa34.72■■■■□ 3.15
KATNB1-202ENST00000562542 AQRO60306 1485 aaKnown RBP eCLIP34.71■■■■□ 3.153e-6■■□□□ 13.8
KATNB1-202ENST00000562542 DNMBPQ6XZF7 1577 aa34.7■■■■□ 3.15
KATNB1-202ENST00000562542 ARAP1Q96P48 1450 aa34.69■■■■□ 3.14
KATNB1-202ENST00000562542 TARBP1Q13395 1621 aaKnown RBP34.6■■■■□ 3.13
KATNB1-202ENST00000562542 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
KATNB1-202ENST00000562542 RAD54L2Q9Y4B4 1467 aa34.4■■■■□ 3.1
KATNB1-202ENST00000562542 TDRD9Q8NDG6 1382 aaKnown RBP34.39■■■■□ 3.1
KATNB1-202ENST00000562542 AEBP2Q6ZN18 517 aaPredicted RBP34.36■■■■□ 3.09
KATNB1-202ENST00000562542 SOGA1O94964 1423 aa34.36■■■■□ 3.09
KATNB1-202ENST00000562542 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
KATNB1-202ENST00000562542 CHMP7Q8WUX9 453 aaPredicted RBP34.3■■■■□ 3.08
KATNB1-202ENST00000562542 CLASP1Q7Z460 1538 aa34.28■■■■□ 3.08
KATNB1-202ENST00000562542 SYNJ1O43426 1573 aa34.25■■■■□ 3.07
KATNB1-202ENST00000562542 FGD5Q6ZNL6 1462 aa34.2■■■■□ 3.07
KATNB1-202ENST00000562542 WDR97A6NE52 1622 aa34.19■■■■□ 3.06
KATNB1-202ENST00000562542 MAGI1Q96QZ7 1491 aaPredicted RBP34.19■■■■□ 3.06
KATNB1-202ENST00000562542 GRIN2BQ13224 1484 aa34.13■■■■□ 3.05
KATNB1-202ENST00000562542 SYNJ2O15056 1496 aa34.09■■■■□ 3.05
KATNB1-202ENST00000562542 CUX1P39880 1505 aa34.04■■■■□ 3.04
KATNB1-202ENST00000562542 GAPVD1Q14C86 1478 aa34.02■■■■□ 3.04
KATNB1-202ENST00000562542 PBRM1Q86U86 1689 aa33.91■■■■□ 3.02
KATNB1-202ENST00000562542 ABCA5Q8WWZ7 1642 aa33.74■■■□□ 2.99
KATNB1-202ENST00000562542 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
KATNB1-202ENST00000562542 ERCC6L2Q5T890 1561 aa33.72■■■□□ 2.99
KATNB1-202ENST00000562542 GRIN2AQ12879 1464 aa33.69■■■□□ 2.98
KATNB1-202ENST00000562542 CEP170Q5SW79 1584 aa33.62■■■□□ 2.97
KATNB1-202ENST00000562542 NUP160Q12769 1436 aa33.57■■■□□ 2.96
KATNB1-202ENST00000562542 ADAMTS12P58397 1594 aa33.56■■■□□ 2.96
KATNB1-202ENST00000562542 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
KATNB1-202ENST00000562542 SHROOM2Q13796 1616 aa33.46■■■□□ 2.95
KATNB1-202ENST00000562542 FHAD1B1AJZ9 1412 aa33.45■■■□□ 2.95
KATNB1-202ENST00000562542 KIF13AQ9H1H9 1805 aa33.41■■■□□ 2.94
KATNB1-202ENST00000562542 PRG4Q92954 1404 aaPredicted RBP33.36■■■□□ 2.93
KATNB1-202ENST00000562542 ERICH3Q5RHP9 1530 aa33.31■■■□□ 2.92
KATNB1-202ENST00000562542 FAM69CQ0P6D2 419 aa33.29■■■□□ 2.92
KATNB1-202ENST00000562542 TOP2BQ02880 1626 aa33.28■■■□□ 2.92
KATNB1-202ENST00000562542 BIVM-ERCC5R4GMW8 1640 aa33.28■■■□□ 2.92
KATNB1-202ENST00000562542 JPH4Q96JJ6 628 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 426.7 ms