RNA–Protein interactions for RNA: ENST00000563486.1

NUP93-207, Transcript of nucleoporin 93, humanhuman

TSL 2

Gene NUP93, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-207ENST00000563486 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
NUP93-207ENST00000563486 CHIC1Q5VXU3 224 aa21.96■■□□□ 1.11
NUP93-207ENST00000563486 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
NUP93-207ENST00000563486 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
NUP93-207ENST00000563486 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
NUP93-207ENST00000563486 FOXD1Q16676 465 aa17.7■□□□□ 0.42
NUP93-207ENST00000563486 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
NUP93-207ENST00000563486 ADRA2BP18089 450 aa16.94■□□□□ 0.3
NUP93-207ENST00000563486 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
NUP93-207ENST00000563486 MSH5O43196 834 aa16.55■□□□□ 0.24
NUP93-207ENST00000563486 PPP4R3CPQ6ZMV5 832 aa15.81■□□□□ 0.12
NUP93-207ENST00000563486 KCNA4P22459 653 aa15.69■□□□□ 0.1
NUP93-207ENST00000563486 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
NUP93-207ENST00000563486 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
NUP93-207ENST00000563486 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
NUP93-207ENST00000563486 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
NUP93-207ENST00000563486 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
NUP93-207ENST00000563486 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
NUP93-207ENST00000563486 DMRT2Q9Y5R5 561 aa15.19■□□□□ 0.02
NUP93-207ENST00000563486 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
NUP93-207ENST00000563486 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
NUP93-207ENST00000563486 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
NUP93-207ENST00000563486 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
NUP93-207ENST00000563486 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
NUP93-207ENST00000563486 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
NUP93-207ENST00000563486 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
NUP93-207ENST00000563486 ZBTB22O15209 634 aa14.43□□□□□ -0.1
NUP93-207ENST00000563486 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
NUP93-207ENST00000563486 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
NUP93-207ENST00000563486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
NUP93-207ENST00000563486 MYCNP04198 464 aaPredicted RBP14.1□□□□□ -0.15
NUP93-207ENST00000563486 RNF39Q9H2S5 420 aa14.07□□□□□ -0.16
NUP93-207ENST00000563486 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
NUP93-207ENST00000563486 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
NUP93-207ENST00000563486 U3KPZ7 1027 aaPredicted RBP13.95□□□□□ -0.18
NUP93-207ENST00000563486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.9□□□□□ -0.18
NUP93-207ENST00000563486 HNRNPUL2Q1KMD3 747 aaKnown RBP13.9□□□□□ -0.18
NUP93-207ENST00000563486 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
NUP93-207ENST00000563486 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
NUP93-207ENST00000563486 APLP2Q06481 763 aa13.71□□□□□ -0.21
NUP93-207ENST00000563486 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
NUP93-207ENST00000563486 CAPN15O75808 1086 aa13.54□□□□□ -0.24
NUP93-207ENST00000563486 SPINK5Q9NQ38 1064 aaPredicted RBP13.48□□□□□ -0.25
NUP93-207ENST00000563486 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
NUP93-207ENST00000563486 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
NUP93-207ENST00000563486 DSG3P32926 999 aa13.29□□□□□ -0.28
NUP93-207ENST00000563486 POLA2Q14181 598 aa13.24□□□□□ -0.29
NUP93-207ENST00000563486 ABCB7O75027 752 aa13.19□□□□□ -0.3
NUP93-207ENST00000563486 FKBP8Q14318 412 aa13.14□□□□□ -0.31
NUP93-207ENST00000563486 FBLN2P98095 1184 aa13.12□□□□□ -0.31
NUP93-207ENST00000563486 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
NUP93-207ENST00000563486 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
NUP93-207ENST00000563486 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
NUP93-207ENST00000563486 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
NUP93-207ENST00000563486 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
NUP93-207ENST00000563486 SPDYE2BA6NHP3 402 aa12.75□□□□□ -0.37
NUP93-207ENST00000563486 SPDYE6P0CI01 402 aa12.75□□□□□ -0.37
NUP93-207ENST00000563486 SPDYE2Q495Y8 402 aa12.75□□□□□ -0.37
NUP93-207ENST00000563486 PROM2Q8N271 834 aa12.75□□□□□ -0.37
NUP93-207ENST00000563486 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
NUP93-207ENST00000563486 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
NUP93-207ENST00000563486 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
NUP93-207ENST00000563486 PABPN1Q86U42 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
NUP93-207ENST00000563486 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
NUP93-207ENST00000563486 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
NUP93-207ENST00000563486 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
NUP93-207ENST00000563486 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
NUP93-207ENST00000563486 REM2Q8IYK8 340 aaPredicted RBP12.38□□□□□ -0.43
NUP93-207ENST00000563486 SPDYE1Q8NFV5 336 aaPredicted RBP12.32□□□□□ -0.44
NUP93-207ENST00000563486 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
NUP93-207ENST00000563486 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
NUP93-207ENST00000563486 IFNLR1Q8IU57 520 aaPredicted RBP12.27□□□□□ -0.45
NUP93-207ENST00000563486 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
NUP93-207ENST00000563486 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
NUP93-207ENST00000563486 MIER1Q8N108 512 aa12.22□□□□□ -0.45
NUP93-207ENST00000563486 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
NUP93-207ENST00000563486 PLEKHG5O94827 1062 aa12.19□□□□□ -0.46
NUP93-207ENST00000563486 POTEHQ6S545 545 aa12.19□□□□□ -0.46
NUP93-207ENST00000563486 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
NUP93-207ENST00000563486 PRR29P0C7W0 189 aa12.16□□□□□ -0.46
NUP93-207ENST00000563486 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
NUP93-207ENST00000563486 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
NUP93-207ENST00000563486 PIP4P2Q8N4L2 257 aa12.05□□□□□ -0.48
NUP93-207ENST00000563486 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUP93-207ENST00000563486 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
NUP93-207ENST00000563486 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
NUP93-207ENST00000563486 PKD2Q13563 968 aa11.95□□□□□ -0.5
NUP93-207ENST00000563486 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
NUP93-207ENST00000563486 NUBP1P53384 320 aa11.89□□□□□ -0.51
NUP93-207ENST00000563486 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
NUP93-207ENST00000563486 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
NUP93-207ENST00000563486 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
NUP93-207ENST00000563486 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
NUP93-207ENST00000563486 GSE1Q14687 1217 aa11.84□□□□□ -0.51
NUP93-207ENST00000563486 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
NUP93-207ENST00000563486 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
NUP93-207ENST00000563486 HAX1O00165 279 aa11.81□□□□□ -0.52
NUP93-207ENST00000563486 TRIM41Q8WV44 630 aa11.81□□□□□ -0.52
NUP93-207ENST00000563486 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
NUP93-207ENST00000563486 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms